fast.genomicscompare 6,575 genera of bacteria & archaea

 

Mangrovitalea sediminis M11-4

Genome identifier: GCF_002514725.1

NCBI assembly name: ASM251472v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Oleiphilaceae, Mangrovitalea, Mangrovitalea sediminis

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Marinobacteraceae, Mangrovitalea, Mangrovitalea sediminis

Scaffolds: 14

Genes: 3,985 Protein-coding: 3,910 RNAs: 58 pseudogenes: 17

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_NTLB01000001.1 Mangrovitalea sediminis strain M11-4 Scaffold1_1, whole genome shotgun sequence 1,269,568
NZ_NTLB01000002.1 Mangrovitalea sediminis strain M11-4 Scaffold1_2, whole genome shotgun sequence 226,086
NZ_NTLB01000003.1 Mangrovitalea sediminis strain M11-4 Scaffold2_1, whole genome shotgun sequence 653,158
NZ_NTLB01000004.1 Mangrovitalea sediminis strain M11-4 Scaffold3_1, whole genome shotgun sequence 589,359
NZ_NTLB01000005.1 Mangrovitalea sediminis strain M11-4 Scaffold4_1, whole genome shotgun sequence 577,292
NZ_NTLB01000006.1 Mangrovitalea sediminis strain M11-4 Scaffold5_1, whole genome shotgun sequence 450,733
NZ_NTLB01000007.1 Mangrovitalea sediminis strain M11-4 Scaffold6_1, whole genome shotgun sequence 384,812
NZ_NTLB01000008.1 Mangrovitalea sediminis strain M11-4 Scaffold7_1, whole genome shotgun sequence 171,398
NZ_NTLB01000009.1 Mangrovitalea sediminis strain M11-4 Scaffold8_1, whole genome shotgun sequence 35,584
NZ_NTLB01000010.1 Mangrovitalea sediminis strain M11-4 Scaffold9_1, whole genome shotgun sequence 15,552
NZ_NTLB01000011.1 Mangrovitalea sediminis strain M11-4 Scaffold10_1, whole genome shotgun sequence 9,175
NZ_NTLB01000012.1 Mangrovitalea sediminis strain M11-4 Scaffold11_1, whole genome shotgun sequence 5,409
NZ_NTLB01000013.1 Mangrovitalea sediminis strain M11-4 Scaffold12_1, whole genome shotgun sequence 1,164
NZ_NTLB01000014.1 Mangrovitalea sediminis strain M11-4 Scaffold13_1, whole genome shotgun sequence 1,079

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory