fast.genomicscompare 6,575 genera of bacteria & archaea

 

Longimonas halophila KCTC 42399

Genome identifier: GCF_002554705.1

NCBI assembly name: ASM255470v1

GTDB taxonomy: Bacteria, Bacteroidota, Rhodothermia, Rhodothermales, Salinibacteraceae, Longimonas, Longimonas halophila

NCBI taxonomy: Bacteria, Rhodothermota, Rhodothermia, Rhodothermales, Salisaetaceae, Longimonas, Longimonas halophila

Scaffolds: 35

Genes: 2,993 Protein-coding: 2,923 RNAs: 49 pseudogenes: 21

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_PDEP01000001.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00001, whole genome shotgun sequence 659,892
NZ_PDEP01000002.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00002, whole genome shotgun sequence 337,277
NZ_PDEP01000003.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00003, whole genome shotgun sequence 332,882
NZ_PDEP01000004.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00004, whole genome shotgun sequence 269,315
NZ_PDEP01000005.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00005, whole genome shotgun sequence 251,081
NZ_PDEP01000006.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00006, whole genome shotgun sequence 249,688
NZ_PDEP01000007.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00007, whole genome shotgun sequence 234,766
NZ_PDEP01000008.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00008, whole genome shotgun sequence 196,407
NZ_PDEP01000009.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00009, whole genome shotgun sequence 170,600
NZ_PDEP01000010.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00010, whole genome shotgun sequence 165,702
NZ_PDEP01000011.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00011, whole genome shotgun sequence 155,686
NZ_PDEP01000012.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00012, whole genome shotgun sequence 102,175
NZ_PDEP01000013.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00013, whole genome shotgun sequence 96,483
NZ_PDEP01000014.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00014, whole genome shotgun sequence 95,202
NZ_PDEP01000015.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00015, whole genome shotgun sequence 94,463
NZ_PDEP01000016.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00016, whole genome shotgun sequence 89,473
NZ_PDEP01000017.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00017, whole genome shotgun sequence 40,053
NZ_PDEP01000018.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00018, whole genome shotgun sequence 34,399
NZ_PDEP01000019.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00019, whole genome shotgun sequence 31,500
NZ_PDEP01000020.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00020, whole genome shotgun sequence 24,658
NZ_PDEP01000021.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00021, whole genome shotgun sequence 23,436
NZ_PDEP01000022.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00022, whole genome shotgun sequence 20,984
NZ_PDEP01000023.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00023, whole genome shotgun sequence 15,546
NZ_PDEP01000024.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00024, whole genome shotgun sequence 10,685
NZ_PDEP01000025.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00025, whole genome shotgun sequence 8,016
NZ_PDEP01000026.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00026, whole genome shotgun sequence 7,998
NZ_PDEP01000027.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00028, whole genome shotgun sequence 3,989
NZ_PDEP01000028.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00029, whole genome shotgun sequence 1,257
NZ_PDEP01000029.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00030, whole genome shotgun sequence 1,195
NZ_PDEP01000030.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00031, whole genome shotgun sequence 1,133
NZ_PDEP01000031.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00032, whole genome shotgun sequence 1,030
NZ_PDEP01000032.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00033, whole genome shotgun sequence 1,013
NZ_PDEP01000033.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00034, whole genome shotgun sequence 886
NZ_PDEP01000034.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00035, whole genome shotgun sequence 635
NZ_PDEP01000035.1 Longimonas halophila strain KCTC 42399 Longimonas_halophila_contig_00036, whole genome shotgun sequence 465

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory