fast.genomicscompare 6,575 genera of bacteria & archaea

 

Marinicella litoralis KMM 3900

Genome identifier: GCF_002591915.1

NCBI assembly name: ASM259191v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Marinicellaceae, Marinicella, Marinicella litoralis

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Oceanospirillales, Alcanivoracaceae, Marinicella, Marinicella litoralis

Scaffolds: 21

Genes: 2,949 Protein-coding: 2,889 RNAs: 45 pseudogenes: 15

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_NIHB01000001.1 Marinicella litoralis strain KMM 3900 contig1, whole genome shotgun sequence 1,487,865
NZ_NIHB01000002.1 Marinicella litoralis strain KMM 3900 contig2, whole genome shotgun sequence 856,885
NZ_NIHB01000003.1 Marinicella litoralis strain KMM 3900 contig3, whole genome shotgun sequence 321,038
NZ_NIHB01000004.1 Marinicella litoralis strain KMM 3900 contig4, whole genome shotgun sequence 220,139
NZ_NIHB01000005.1 Marinicella litoralis strain KMM 3900 contig5, whole genome shotgun sequence 149,988
NZ_NIHB01000006.1 Marinicella litoralis strain KMM 3900 contig6, whole genome shotgun sequence 125,768
NZ_NIHB01000007.1 Marinicella litoralis strain KMM 3900 contig7, whole genome shotgun sequence 130,193
NZ_NIHB01000008.1 Marinicella litoralis strain KMM 3900 contig8, whole genome shotgun sequence 17,731
NZ_NIHB01000009.1 Marinicella litoralis strain KMM 3900 contig9, whole genome shotgun sequence 15,337
NZ_NIHB01000010.1 Marinicella litoralis strain KMM 3900 contig10, whole genome shotgun sequence 5,819
NZ_NIHB01000011.1 Marinicella litoralis strain KMM 3900 contig11, whole genome shotgun sequence 3,901
NZ_NIHB01000012.1 Marinicella litoralis strain KMM 3900 contig12, whole genome shotgun sequence 3,229
NZ_NIHB01000013.1 Marinicella litoralis strain KMM 3900 contig13, whole genome shotgun sequence 2,304
NZ_NIHB01000014.1 Marinicella litoralis strain KMM 3900 contig14, whole genome shotgun sequence 1,894
NZ_NIHB01000015.1 Marinicella litoralis strain KMM 3900 contig15, whole genome shotgun sequence 1,564
NZ_NIHB01000016.1 Marinicella litoralis strain KMM 3900 contig16, whole genome shotgun sequence 1,242
NZ_NIHB01000017.1 Marinicella litoralis strain KMM 3900 contig17, whole genome shotgun sequence 1,045
NZ_NIHB01000018.1 Marinicella litoralis strain KMM 3900 contig18, whole genome shotgun sequence 589
NZ_NIHB01000019.1 Marinicella litoralis strain KMM 3900 contig19, whole genome shotgun sequence 301
NZ_NIHB01000020.1 Marinicella litoralis strain KMM 3900 contig20, whole genome shotgun sequence 272
NZ_NIHB01000021.1 Marinicella litoralis strain KMM 3900 contig21, whole genome shotgun sequence 230

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory