fast.genomicscompare 6,575 genera of bacteria & archaea

 

Methylosinus trichosporium OB3b

Genome identifier: GCF_002752655.1

NCBI assembly name: ASM275265v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Beijerinckiaceae, Methylosinus, Methylosinus trichosporium

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Methylocystaceae, Methylosinus, Methylosinus trichosporium

Scaffolds: 4

Genes: 4,818 Protein-coding: 4,635 RNAs: 63 pseudogenes: 120

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP023737.1 Methylosinus trichosporium OB3b chromosome, complete genome 4,508,832
NZ_CP023738.1 Methylosinus trichosporium OB3b plasmid pOB3b1, complete sequence 285,280
NZ_CP023739.1 Methylosinus trichosporium OB3b plasmid pOB3b2, complete sequence 209,102
NZ_CP023740.1 Methylosinus trichosporium OB3b plasmid pOB3b3, complete sequence 180,219

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory