fast.genomicscompare 6,575 genera of bacteria & archaea

 

Confluentibacter lentus HJM-3

Genome identifier: GCF_002806995.1

NCBI assembly name: ASM280699v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Confluentibacter, Confluentibacter lentus

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Confluentibacter, Confluentibacter lentus

Scaffolds: 32

Genes: 3,002 Protein-coding: 2,942 RNAs: 49 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_NIHE01000001.1 Confluentibacter lentus strain HJM-3 contig1, whole genome shotgun sequence 870,195
NZ_NIHE01000002.1 Confluentibacter lentus strain HJM-3 contig2, whole genome shotgun sequence 669,655
NZ_NIHE01000003.1 Confluentibacter lentus strain HJM-3 contig3, whole genome shotgun sequence 489,539
NZ_NIHE01000004.1 Confluentibacter lentus strain HJM-3 contig4, whole genome shotgun sequence 265,394
NZ_NIHE01000005.1 Confluentibacter lentus strain HJM-3 contig5, whole genome shotgun sequence 248,018
NZ_NIHE01000006.1 Confluentibacter lentus strain HJM-3 contig6, whole genome shotgun sequence 190,922
NZ_NIHE01000007.1 Confluentibacter lentus strain HJM-3 contig7, whole genome shotgun sequence 7,837
NZ_NIHE01000008.1 Confluentibacter lentus strain HJM-3 contig8, whole genome shotgun sequence 176,106
NZ_NIHE01000009.1 Confluentibacter lentus strain HJM-3 contig9, whole genome shotgun sequence 182,741
NZ_NIHE01000010.1 Confluentibacter lentus strain HJM-3 contig10, whole genome shotgun sequence 127,673
NZ_NIHE01000011.1 Confluentibacter lentus strain HJM-3 contig11, whole genome shotgun sequence 86,465
NZ_NIHE01000012.1 Confluentibacter lentus strain HJM-3 contig12, whole genome shotgun sequence 5,724
NZ_NIHE01000013.1 Confluentibacter lentus strain HJM-3 contig13, whole genome shotgun sequence 5,028
NZ_NIHE01000014.1 Confluentibacter lentus strain HJM-3 contig14, whole genome shotgun sequence 3,500
NZ_NIHE01000015.1 Confluentibacter lentus strain HJM-3 contig15, whole genome shotgun sequence 2,414
NZ_NIHE01000016.1 Confluentibacter lentus strain HJM-3 contig16, whole genome shotgun sequence 2,098
NZ_NIHE01000017.1 Confluentibacter lentus strain HJM-3 contig17, whole genome shotgun sequence 2,081
NZ_NIHE01000018.1 Confluentibacter lentus strain HJM-3 contig18, whole genome shotgun sequence 1,736
NZ_NIHE01000019.1 Confluentibacter lentus strain HJM-3 contig19, whole genome shotgun sequence 1,304
NZ_NIHE01000020.1 Confluentibacter lentus strain HJM-3 contig20, whole genome shotgun sequence 1,140
NZ_NIHE01000021.1 Confluentibacter lentus strain HJM-3 contig21, whole genome shotgun sequence 1,074
NZ_NIHE01000022.1 Confluentibacter lentus strain HJM-3 contig22, whole genome shotgun sequence 980
NZ_NIHE01000023.1 Confluentibacter lentus strain HJM-3 contig23, whole genome shotgun sequence 905
NZ_NIHE01000024.1 Confluentibacter lentus strain HJM-3 contig24, whole genome shotgun sequence 820
NZ_NIHE01000025.1 Confluentibacter lentus strain HJM-3 contig25, whole genome shotgun sequence 799
NZ_NIHE01000026.1 Confluentibacter lentus strain HJM-3 contig26, whole genome shotgun sequence 752
NZ_NIHE01000027.1 Confluentibacter lentus strain HJM-3 contig27, whole genome shotgun sequence 686
NZ_NIHE01000028.1 Confluentibacter lentus strain HJM-3 contig28, whole genome shotgun sequence 677
NZ_NIHE01000029.1 Confluentibacter lentus strain HJM-3 contig29, whole genome shotgun sequence 657
NZ_NIHE01000030.1 Confluentibacter lentus strain HJM-3 contig30, whole genome shotgun sequence 634
NZ_NIHE01000031.1 Confluentibacter lentus strain HJM-3 contig31, whole genome shotgun sequence 557
NZ_NIHE01000032.1 Confluentibacter lentus strain HJM-3 contig32, whole genome shotgun sequence 503

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory