fast.genomicscompare 6,575 genera of bacteria & archaea

 

Halegenticoccus soli SYSU A9-0

Genome identifier: GCF_002844195.1

NCBI assembly name: ASM284419v1

GTDB taxonomy: Archaea, Halobacteriota, Halobacteria, Halobacteriales, Haloferacaceae, Halegenticoccus, Halegenticoccus soli

NCBI taxonomy: Archaea, Euryarchaeota, Halobacteria, Haloferacales, Haloferacaceae, Halegenticoccus, Halegenticoccus soli

Scaffolds: 15

Genes: 4,611 Protein-coding: 4,429 RNAs: 60 pseudogenes: 122

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_KZ537954.1 Halegenticoccus soli strain SYSU A9-0 NODE_15_length_4504_cov_292.464, whole genome shotgun sequence 4,504
NZ_PEND01000001.1 Halegenticoccus soli strain SYSU A9-0 contig001, whole genome shotgun sequence 935,763
NZ_PEND01000002.1 Halegenticoccus soli strain SYSU A9-0 contig002, whole genome shotgun sequence 730,647
NZ_PEND01000003.1 Halegenticoccus soli strain SYSU A9-0 contig003, whole genome shotgun sequence 561,319
NZ_PEND01000004.1 Halegenticoccus soli strain SYSU A9-0 contig004, whole genome shotgun sequence 549,609
NZ_PEND01000005.1 Halegenticoccus soli strain SYSU A9-0 contig005, whole genome shotgun sequence 526,437
NZ_PEND01000006.1 Halegenticoccus soli strain SYSU A9-0 contig006, whole genome shotgun sequence 358,949
NZ_PEND01000007.1 Halegenticoccus soli strain SYSU A9-0 contig007, whole genome shotgun sequence 295,658
NZ_PEND01000008.1 Halegenticoccus soli strain SYSU A9-0 contig008, whole genome shotgun sequence 145,959
NZ_PEND01000009.1 Halegenticoccus soli strain SYSU A9-0 contig009, whole genome shotgun sequence 126,362
NZ_PEND01000010.1 Halegenticoccus soli strain SYSU A9-0 contig010, whole genome shotgun sequence 125,278
NZ_PEND01000011.1 Halegenticoccus soli strain SYSU A9-0 contig011, whole genome shotgun sequence 95,633
NZ_PEND01000012.1 Halegenticoccus soli strain SYSU A9-0 contig012, whole genome shotgun sequence 69,860
NZ_PEND01000013.1 Halegenticoccus soli strain SYSU A9-0 contig013, whole genome shotgun sequence 47,805
NZ_PEND01000014.1 Halegenticoccus soli strain SYSU A9-0 contig014, whole genome shotgun sequence 41,618

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory