fast.genomicscompare 6,575 genera of bacteria & archaea

 

Tabrizicola aquatica RCRI19

Genome identifier: GCF_002900975.1

NCBI assembly name: ASM290097v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Tabrizicola, Tabrizicola aquatica

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Tabrizicola, Tabrizicola aquatica

Scaffolds: 12

Genes: 3,885 Protein-coding: 3,811 RNAs: 52 pseudogenes: 22

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_PJON01000001.1 Tabrizicola aquatica strain RCRI19 contig1, whole genome shotgun sequence 1,703,699
NZ_PJON01000002.1 Tabrizicola aquatica strain RCRI19 contig2, whole genome shotgun sequence 692,795
NZ_PJON01000003.1 Tabrizicola aquatica strain RCRI19 contig3, whole genome shotgun sequence 536,469
NZ_PJON01000004.1 Tabrizicola aquatica strain RCRI19 contig4, whole genome shotgun sequence 361,334
NZ_PJON01000005.1 Tabrizicola aquatica strain RCRI19 contig5, whole genome shotgun sequence 296,857
NZ_PJON01000006.1 Tabrizicola aquatica strain RCRI19 contig6, whole genome shotgun sequence 185,236
NZ_PJON01000007.1 Tabrizicola aquatica strain RCRI19 contig7, whole genome shotgun sequence 60,379
NZ_PJON01000008.1 Tabrizicola aquatica strain RCRI19 contig8, whole genome shotgun sequence 24,092
NZ_PJON01000009.1 Tabrizicola aquatica strain RCRI19 contig9, whole genome shotgun sequence 5,722
NZ_PJON01000010.1 Tabrizicola aquatica strain RCRI19 contig10, whole genome shotgun sequence 2,509
NZ_PJON01000011.1 Tabrizicola aquatica strain RCRI19 contig11, whole genome shotgun sequence 786
NZ_PJON01000012.1 Tabrizicola aquatica strain RCRI19 contig12, whole genome shotgun sequence 549

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory