fast.genomicscompare 6,575 genera of bacteria & archaea

 

Salinigranum rubrum GX10

Genome identifier: GCF_002906575.1

NCBI assembly name: ASM290657v1

GTDB taxonomy: Archaea, Halobacteriota, Halobacteria, Halobacteriales, Haloferacaceae, Salinigranum, Salinigranum rubrum

NCBI taxonomy: Archaea, Euryarchaeota, Halobacteria, Haloferacales, Haloferacaceae, Salinigranum, Salinigranum rubrum

Scaffolds: 6

Genes: 5,067 Protein-coding: 4,739 RNAs: 57 pseudogenes: 271

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP026309.1 Salinigranum rubrum strain GX10 chromosome, complete genome 4,250,563
NZ_CP026310.1 Salinigranum rubrum strain GX10 plasmid unnamed1, complete sequence 237,003
NZ_CP026311.1 Salinigranum rubrum strain GX10 plasmid unnamed2, complete sequence 198,037
NZ_CP026312.1 Salinigranum rubrum strain GX10 plasmid unnamed3, complete sequence 118,877
NZ_CP026313.1 Salinigranum rubrum strain GX10 plasmid unnamed4, complete sequence 129,442
NZ_CP026314.1 Salinigranum rubrum strain GX10 plasmid unnamed5, complete sequence 39,196

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory