fast.genomicscompare 6,575 genera of bacteria & archaea

 

Clostridium_L algidicarnis DSM 15099

Genome identifier: GCF_002934235.1

NCBI assembly name: ASM293423v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Clostridiales, Clostridiaceae, Clostridium_L, Clostridium_L algidicarnis

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Clostridiaceae, Clostridium, Clostridium algidicarnis

Scaffolds: 42

Genes: 2,685 Protein-coding: 2,570 RNAs: 74 pseudogenes: 41

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_PTIS01000001.1 Clostridium algidicarnis DSM 15099 Ga0131113_101, whole genome shotgun sequence 460,000
NZ_PTIS01000002.1 Clostridium algidicarnis DSM 15099 Ga0131113_102, whole genome shotgun sequence 268,389
NZ_PTIS01000003.1 Clostridium algidicarnis DSM 15099 Ga0131113_103, whole genome shotgun sequence 232,623
NZ_PTIS01000004.1 Clostridium algidicarnis DSM 15099 Ga0131113_104, whole genome shotgun sequence 143,275
NZ_PTIS01000005.1 Clostridium algidicarnis DSM 15099 Ga0131113_105, whole genome shotgun sequence 134,692
NZ_PTIS01000006.1 Clostridium algidicarnis DSM 15099 Ga0131113_106, whole genome shotgun sequence 123,119
NZ_PTIS01000007.1 Clostridium algidicarnis DSM 15099 Ga0131113_107, whole genome shotgun sequence 123,101
NZ_PTIS01000008.1 Clostridium algidicarnis DSM 15099 Ga0131113_108, whole genome shotgun sequence 122,852
NZ_PTIS01000009.1 Clostridium algidicarnis DSM 15099 Ga0131113_109, whole genome shotgun sequence 108,963
NZ_PTIS01000010.1 Clostridium algidicarnis DSM 15099 Ga0131113_110, whole genome shotgun sequence 104,107
NZ_PTIS01000011.1 Clostridium algidicarnis DSM 15099 Ga0131113_111, whole genome shotgun sequence 90,542
NZ_PTIS01000012.1 Clostridium algidicarnis DSM 15099 Ga0131113_112, whole genome shotgun sequence 88,949
NZ_PTIS01000013.1 Clostridium algidicarnis DSM 15099 Ga0131113_113, whole genome shotgun sequence 87,903
NZ_PTIS01000014.1 Clostridium algidicarnis DSM 15099 Ga0131113_114, whole genome shotgun sequence 81,652
NZ_PTIS01000015.1 Clostridium algidicarnis DSM 15099 Ga0131113_115, whole genome shotgun sequence 78,519
NZ_PTIS01000016.1 Clostridium algidicarnis DSM 15099 Ga0131113_116, whole genome shotgun sequence 61,032
NZ_PTIS01000017.1 Clostridium algidicarnis DSM 15099 Ga0131113_117, whole genome shotgun sequence 57,911
NZ_PTIS01000018.1 Clostridium algidicarnis DSM 15099 Ga0131113_118, whole genome shotgun sequence 56,911
NZ_PTIS01000019.1 Clostridium algidicarnis DSM 15099 Ga0131113_119, whole genome shotgun sequence 52,085
NZ_PTIS01000020.1 Clostridium algidicarnis DSM 15099 Ga0131113_120, whole genome shotgun sequence 47,614
NZ_PTIS01000021.1 Clostridium algidicarnis DSM 15099 Ga0131113_121, whole genome shotgun sequence 46,507
NZ_PTIS01000022.1 Clostridium algidicarnis DSM 15099 Ga0131113_122, whole genome shotgun sequence 38,842
NZ_PTIS01000023.1 Clostridium algidicarnis DSM 15099 Ga0131113_123, whole genome shotgun sequence 34,308
NZ_PTIS01000024.1 Clostridium algidicarnis DSM 15099 Ga0131113_124, whole genome shotgun sequence 31,702
NZ_PTIS01000025.1 Clostridium algidicarnis DSM 15099 Ga0131113_125, whole genome shotgun sequence 30,298
NZ_PTIS01000026.1 Clostridium algidicarnis DSM 15099 Ga0131113_126, whole genome shotgun sequence 25,048
NZ_PTIS01000027.1 Clostridium algidicarnis DSM 15099 Ga0131113_127, whole genome shotgun sequence 24,496
NZ_PTIS01000028.1 Clostridium algidicarnis DSM 15099 Ga0131113_128, whole genome shotgun sequence 21,908
NZ_PTIS01000029.1 Clostridium algidicarnis DSM 15099 Ga0131113_129, whole genome shotgun sequence 11,842
NZ_PTIS01000030.1 Clostridium algidicarnis DSM 15099 Ga0131113_130, whole genome shotgun sequence 11,806
NZ_PTIS01000031.1 Clostridium algidicarnis DSM 15099 Ga0131113_131, whole genome shotgun sequence 8,524
NZ_PTIS01000032.1 Clostridium algidicarnis DSM 15099 Ga0131113_132, whole genome shotgun sequence 4,460
NZ_PTIS01000033.1 Clostridium algidicarnis DSM 15099 Ga0131113_133, whole genome shotgun sequence 4,265
NZ_PTIS01000034.1 Clostridium algidicarnis DSM 15099 Ga0131113_134, whole genome shotgun sequence 3,421
NZ_PTIS01000035.1 Clostridium algidicarnis DSM 15099 Ga0131113_135, whole genome shotgun sequence 3,032
NZ_PTIS01000036.1 Clostridium algidicarnis DSM 15099 Ga0131113_136, whole genome shotgun sequence 2,126
NZ_PTIS01000037.1 Clostridium algidicarnis DSM 15099 Ga0131113_137, whole genome shotgun sequence 1,899
NZ_PTIS01000038.1 Clostridium algidicarnis DSM 15099 Ga0131113_138, whole genome shotgun sequence 1,543
NZ_PTIS01000039.1 Clostridium algidicarnis DSM 15099 Ga0131113_139, whole genome shotgun sequence 1,270
NZ_PTIS01000040.1 Clostridium algidicarnis DSM 15099 Ga0131113_140, whole genome shotgun sequence 1,226
NZ_PTIS01000041.1 Clostridium algidicarnis DSM 15099 Ga0131113_141, whole genome shotgun sequence 1,220
NZ_PTIS01000042.1 Clostridium algidicarnis DSM 15099 Ga0131113_142, whole genome shotgun sequence 1,161

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory