fast.genomicscompare 6,575 genera of bacteria & archaea

 

Jejuia pallidilutea DSM 21165

Genome identifier: GCF_002973595.1

NCBI assembly name: ASM297359v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Jejuia, Jejuia pallidilutea

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Jejuia, Jejuia pallidilutea

Scaffolds: 34

Genes: 3,473 Protein-coding: 3,414 RNAs: 45 pseudogenes: 14

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_PVEO01000001.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_101, whole genome shotgun sequence 811,080
NZ_PVEO01000002.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_102, whole genome shotgun sequence 588,378
NZ_PVEO01000003.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_103, whole genome shotgun sequence 404,875
NZ_PVEO01000004.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_104, whole genome shotgun sequence 389,456
NZ_PVEO01000005.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_105, whole genome shotgun sequence 387,031
NZ_PVEO01000006.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_106, whole genome shotgun sequence 267,662
NZ_PVEO01000007.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_107, whole genome shotgun sequence 266,689
NZ_PVEO01000008.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_108, whole genome shotgun sequence 149,024
NZ_PVEO01000009.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_109, whole genome shotgun sequence 145,208
NZ_PVEO01000010.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_110, whole genome shotgun sequence 140,493
NZ_PVEO01000011.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_111, whole genome shotgun sequence 119,305
NZ_PVEO01000012.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_112, whole genome shotgun sequence 101,712
NZ_PVEO01000013.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_113, whole genome shotgun sequence 56,650
NZ_PVEO01000014.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_114, whole genome shotgun sequence 55,584
NZ_PVEO01000015.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_115, whole genome shotgun sequence 55,432
NZ_PVEO01000016.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_116, whole genome shotgun sequence 50,078
NZ_PVEO01000017.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_117, whole genome shotgun sequence 40,890
NZ_PVEO01000018.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_118, whole genome shotgun sequence 13,280
NZ_PVEO01000019.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_119, whole genome shotgun sequence 10,159
NZ_PVEO01000020.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_120, whole genome shotgun sequence 9,860
NZ_PVEO01000021.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_121, whole genome shotgun sequence 9,451
NZ_PVEO01000022.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_122, whole genome shotgun sequence 5,459
NZ_PVEO01000023.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_123, whole genome shotgun sequence 5,396
NZ_PVEO01000024.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_124, whole genome shotgun sequence 5,211
NZ_PVEO01000025.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_125, whole genome shotgun sequence 4,092
NZ_PVEO01000026.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_126, whole genome shotgun sequence 3,956
NZ_PVEO01000027.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_127, whole genome shotgun sequence 2,339
NZ_PVEO01000028.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_128, whole genome shotgun sequence 2,307
NZ_PVEO01000029.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_129, whole genome shotgun sequence 1,805
NZ_PVEO01000030.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_130, whole genome shotgun sequence 1,803
NZ_PVEO01000031.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_131, whole genome shotgun sequence 1,648
NZ_PVEO01000032.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_132, whole genome shotgun sequence 1,573
NZ_PVEO01000033.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_133, whole genome shotgun sequence 1,311
NZ_PVEO01000034.1 Jejuia pallidilutea strain DSM 21165 Ga0180990_134, whole genome shotgun sequence 1,166

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory