fast.genomicscompare 6,575 genera of bacteria & archaea

 

Phyllobacterium myrsinacearum DSM 5892

Genome identifier: GCF_002980555.1

NCBI assembly name: ASM298055v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Phyllobacterium, Phyllobacterium myrsinacearum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Phyllobacteriaceae, Phyllobacterium, Phyllobacterium myrsinacearum

Scaffolds: 44

Genes: 5,251 Protein-coding: 5,153 RNAs: 58 pseudogenes: 40

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_PVBT01000001.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100000, whole genome shotgun sequence 1,416,421
NZ_PVBT01000002.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100001, whole genome shotgun sequence 818,328
NZ_PVBT01000003.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100002, whole genome shotgun sequence 782,320
NZ_PVBT01000004.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100003, whole genome shotgun sequence 417,676
NZ_PVBT01000005.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100004, whole genome shotgun sequence 411,990
NZ_PVBT01000006.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100005, whole genome shotgun sequence 370,845
NZ_PVBT01000007.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100006, whole genome shotgun sequence 329,919
NZ_PVBT01000008.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100007, whole genome shotgun sequence 302,837
NZ_PVBT01000009.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100008, whole genome shotgun sequence 230,101
NZ_PVBT01000010.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100009, whole genome shotgun sequence 215,255
NZ_PVBT01000011.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100010, whole genome shotgun sequence 56,728
NZ_PVBT01000012.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100011, whole genome shotgun sequence 55,449
NZ_PVBT01000013.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100012, whole genome shotgun sequence 11,383
NZ_PVBT01000014.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100013, whole genome shotgun sequence 6,333
NZ_PVBT01000015.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100015, whole genome shotgun sequence 1,198
NZ_PVBT01000016.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100016, whole genome shotgun sequence 1,089
NZ_PVBT01000017.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100017, whole genome shotgun sequence 936
NZ_PVBT01000018.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100018, whole genome shotgun sequence 797
NZ_PVBT01000019.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100019, whole genome shotgun sequence 520
NZ_PVBT01000020.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100020, whole genome shotgun sequence 415
NZ_PVBT01000021.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100021, whole genome shotgun sequence 428
NZ_PVBT01000022.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100022, whole genome shotgun sequence 406
NZ_PVBT01000023.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100023, whole genome shotgun sequence 406
NZ_PVBT01000024.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100024, whole genome shotgun sequence 372
NZ_PVBT01000025.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100025, whole genome shotgun sequence 405
NZ_PVBT01000026.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100026, whole genome shotgun sequence 350
NZ_PVBT01000027.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100027, whole genome shotgun sequence 378
NZ_PVBT01000028.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100030, whole genome shotgun sequence 311
NZ_PVBT01000029.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100031, whole genome shotgun sequence 336
NZ_PVBT01000030.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100033, whole genome shotgun sequence 312
NZ_PVBT01000031.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100034, whole genome shotgun sequence 225
NZ_PVBT01000032.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100035, whole genome shotgun sequence 310
NZ_PVBT01000033.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100036, whole genome shotgun sequence 248
NZ_PVBT01000034.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100037, whole genome shotgun sequence 231
NZ_PVBT01000035.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100038, whole genome shotgun sequence 294
NZ_PVBT01000036.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100039, whole genome shotgun sequence 242
NZ_PVBT01000037.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100042, whole genome shotgun sequence 200
NZ_PVBT01000038.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100043, whole genome shotgun sequence 259
NZ_PVBT01000039.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100044, whole genome shotgun sequence 255
NZ_PVBT01000040.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100045, whole genome shotgun sequence 255
NZ_PVBT01000041.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100046, whole genome shotgun sequence 255
NZ_PVBT01000042.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100047, whole genome shotgun sequence 246
NZ_PVBT01000043.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100048, whole genome shotgun sequence 224
NZ_PVBT01000044.1 Phyllobacterium myrsinacearum strain DSM 5892 ZB100049, whole genome shotgun sequence 212

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory