fast.genomicscompare 6,575 genera of bacteria & archaea

 

Hasllibacter halocynthiae DSM 29318

Genome identifier: GCF_003003095.1

NCBI assembly name: ASM300309v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Hasllibacter, Hasllibacter halocynthiae

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Hasllibacter, Hasllibacter halocynthiae

Scaffolds: 4

Genes: 2,800 Protein-coding: 2,727 RNAs: 48 pseudogenes: 25

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_PVTT01000001.1 Hasllibacter halocynthiae strain DSM 29318 Ga0104489_11, whole genome shotgun sequence 1,395,804
NZ_PVTT01000002.1 Hasllibacter halocynthiae strain DSM 29318 Ga0104489_12, whole genome shotgun sequence 1,262,502
NZ_PVTT01000003.1 Hasllibacter halocynthiae strain DSM 29318 Ga0104489_13, whole genome shotgun sequence 104,129
NZ_PVTT01000004.1 Hasllibacter halocynthiae strain DSM 29318 Ga0104489_14, whole genome shotgun sequence 22,190

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory