fast.genomicscompare 6,575 genera of bacteria & archaea

 

Chroococcus hegewaldii CCALA 016

Genome identifier: GCF_003007785.1

NCBI assembly name: ASM300778v1

GTDB taxonomy: Bacteria, Cyanobacteriota, Cyanobacteriia, Cyanobacteriales, Microcystaceae, Chroococcus, Chroococcus hegewaldii

NCBI taxonomy: Bacteria, Cyanobacteriota, Cyanophyceae, Chroococcales, Aphanothecaceae, Aphanothece, Aphanothece hegewaldii

Scaffolds: 120

Genes: 5,084 Protein-coding: 4,961 RNAs: 43 pseudogenes: 80

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_PXOH01000001.1 Aphanothece hegewaldii CCALA 016 NODE_6_length_418851_cov_68.223_ID_74827, whole genome shotgun sequence 418,851
NZ_PXOH01000002.1 Aphanothece hegewaldii CCALA 016 NODE_12_length_303020_cov_68.5486_ID_74839, whole genome shotgun sequence 303,020
NZ_PXOH01000003.1 Aphanothece hegewaldii CCALA 016 NODE_13_length_291007_cov_68.7778_ID_74841, whole genome shotgun sequence 291,007
NZ_PXOH01000004.1 Aphanothece hegewaldii CCALA 016 NODE_14_length_282582_cov_68.8377_ID_74843, whole genome shotgun sequence 282,582
NZ_PXOH01000005.1 Aphanothece hegewaldii CCALA 016 NODE_16_length_272853_cov_67.8525_ID_74847, whole genome shotgun sequence 272,853
NZ_PXOH01000006.1 Aphanothece hegewaldii CCALA 016 NODE_17_length_265644_cov_71.0079_ID_74849, whole genome shotgun sequence 265,644
NZ_PXOH01000007.1 Aphanothece hegewaldii CCALA 016 NODE_21_length_212785_cov_72.5718_ID_74857, whole genome shotgun sequence 212,785
NZ_PXOH01000008.1 Aphanothece hegewaldii CCALA 016 NODE_26_length_177006_cov_68.6362_ID_74867, whole genome shotgun sequence 177,006
NZ_PXOH01000009.1 Aphanothece hegewaldii CCALA 016 NODE_32_length_156333_cov_68.9827_ID_74879, whole genome shotgun sequence 156,333
NZ_PXOH01000010.1 Aphanothece hegewaldii CCALA 016 NODE_34_length_147170_cov_69.125_ID_74883, whole genome shotgun sequence 147,170
NZ_PXOH01000011.1 Aphanothece hegewaldii CCALA 016 NODE_35_length_144177_cov_70.0203_ID_74891, whole genome shotgun sequence 144,177
NZ_PXOH01000012.1 Aphanothece hegewaldii CCALA 016 NODE_38_length_126362_cov_67.8258_ID_74897, whole genome shotgun sequence 126,362
NZ_PXOH01000013.1 Aphanothece hegewaldii CCALA 016 NODE_39_length_122459_cov_68.3323_ID_74899, whole genome shotgun sequence 122,459
NZ_PXOH01000014.1 Aphanothece hegewaldii CCALA 016 NODE_40_length_119962_cov_67.6576_ID_74913, whole genome shotgun sequence 119,962
NZ_PXOH01000015.1 Aphanothece hegewaldii CCALA 016 NODE_42_length_117626_cov_69.6244_ID_74917, whole genome shotgun sequence 117,626
NZ_PXOH01000016.1 Aphanothece hegewaldii CCALA 016 NODE_43_length_115765_cov_68.1432_ID_74919, whole genome shotgun sequence 115,765
NZ_PXOH01000017.1 Aphanothece hegewaldii CCALA 016 NODE_46_length_109954_cov_79.865_ID_74923, whole genome shotgun sequence 109,954
NZ_PXOH01000018.1 Aphanothece hegewaldii CCALA 016 NODE_47_length_108150_cov_69.0826_ID_74925, whole genome shotgun sequence 108,150
NZ_PXOH01000019.1 Aphanothece hegewaldii CCALA 016 NODE_48_length_104867_cov_70.2256_ID_74927, whole genome shotgun sequence 104,867
NZ_PXOH01000020.1 Aphanothece hegewaldii CCALA 016 NODE_56_length_84091_cov_70.0178_ID_74955, whole genome shotgun sequence 84,091
NZ_PXOH01000021.1 Aphanothece hegewaldii CCALA 016 NODE_58_length_83444_cov_68.5611_ID_74959, whole genome shotgun sequence 83,444
NZ_PXOH01000022.1 Aphanothece hegewaldii CCALA 016 NODE_60_length_82370_cov_68.5343_ID_74963, whole genome shotgun sequence 82,370
NZ_PXOH01000023.1 Aphanothece hegewaldii CCALA 016 NODE_64_length_78254_cov_69.0292_ID_74989, whole genome shotgun sequence 78,254
NZ_PXOH01000024.1 Aphanothece hegewaldii CCALA 016 NODE_71_length_71986_cov_82.6379_ID_75009, whole genome shotgun sequence 71,986
NZ_PXOH01000025.1 Aphanothece hegewaldii CCALA 016 NODE_80_length_64214_cov_70.326_ID_75031, whole genome shotgun sequence 64,214
NZ_PXOH01000026.1 Aphanothece hegewaldii CCALA 016 NODE_85_length_60383_cov_67.7049_ID_75041, whole genome shotgun sequence 60,383
NZ_PXOH01000027.1 Aphanothece hegewaldii CCALA 016 NODE_92_length_57133_cov_66.8076_ID_75049, whole genome shotgun sequence 57,133
NZ_PXOH01000028.1 Aphanothece hegewaldii CCALA 016 NODE_93_length_57125_cov_166.725_ID_75051, whole genome shotgun sequence 57,125
NZ_PXOH01000029.1 Aphanothece hegewaldii CCALA 016 NODE_98_length_54879_cov_70.4276_ID_75079, whole genome shotgun sequence 54,879
NZ_PXOH01000030.1 Aphanothece hegewaldii CCALA 016 NODE_100_length_53904_cov_62.2298_ID_75099, whole genome shotgun sequence 53,904
NZ_PXOH01000031.1 Aphanothece hegewaldii CCALA 016 NODE_107_length_49982_cov_75.5771_ID_75115, whole genome shotgun sequence 49,982
NZ_PXOH01000032.1 Aphanothece hegewaldii CCALA 016 NODE_116_length_45960_cov_67.9343_ID_75153, whole genome shotgun sequence 45,960
NZ_PXOH01000033.1 Aphanothece hegewaldii CCALA 016 NODE_118_length_45842_cov_70.3881_ID_75157, whole genome shotgun sequence 45,842
NZ_PXOH01000034.1 Aphanothece hegewaldii CCALA 016 NODE_120_length_45616_cov_68.9682_ID_75161, whole genome shotgun sequence 45,616
NZ_PXOH01000035.1 Aphanothece hegewaldii CCALA 016 NODE_122_length_44743_cov_68.2857_ID_75169, whole genome shotgun sequence 44,743
NZ_PXOH01000036.1 Aphanothece hegewaldii CCALA 016 NODE_123_length_44139_cov_67.9477_ID_75171, whole genome shotgun sequence 44,139
NZ_PXOH01000037.1 Aphanothece hegewaldii CCALA 016 NODE_125_length_43960_cov_75.6605_ID_75175, whole genome shotgun sequence 43,960
NZ_PXOH01000038.1 Aphanothece hegewaldii CCALA 016 NODE_136_length_40332_cov_67.4873_ID_75199, whole genome shotgun sequence 40,332
NZ_PXOH01000039.1 Aphanothece hegewaldii CCALA 016 NODE_141_length_37761_cov_67.9237_ID_75217, whole genome shotgun sequence 37,761
NZ_PXOH01000040.1 Aphanothece hegewaldii CCALA 016 NODE_146_length_36745_cov_69.6743_ID_75233, whole genome shotgun sequence 36,745
NZ_PXOH01000041.1 Aphanothece hegewaldii CCALA 016 NODE_147_length_36698_cov_59.0592_ID_75235, whole genome shotgun sequence 36,698
NZ_PXOH01000042.1 Aphanothece hegewaldii CCALA 016 NODE_152_length_34906_cov_52.2964_ID_75245, whole genome shotgun sequence 34,906
NZ_PXOH01000043.1 Aphanothece hegewaldii CCALA 016 NODE_155_length_34735_cov_77.8524_ID_75249, whole genome shotgun sequence 34,735
NZ_PXOH01000044.1 Aphanothece hegewaldii CCALA 016 NODE_161_length_32844_cov_68.5382_ID_75261, whole genome shotgun sequence 32,844
NZ_PXOH01000045.1 Aphanothece hegewaldii CCALA 016 NODE_164_length_31829_cov_67.4016_ID_75267, whole genome shotgun sequence 31,829
NZ_PXOH01000046.1 Aphanothece hegewaldii CCALA 016 NODE_175_length_28087_cov_69.8272_ID_75285, whole genome shotgun sequence 28,087
NZ_PXOH01000047.1 Aphanothece hegewaldii CCALA 016 NODE_185_length_25564_cov_69.5992_ID_75311, whole genome shotgun sequence 25,564
NZ_PXOH01000048.1 Aphanothece hegewaldii CCALA 016 NODE_190_length_24790_cov_67.0238_ID_75331, whole genome shotgun sequence 24,790
NZ_PXOH01000049.1 Aphanothece hegewaldii CCALA 016 NODE_192_length_24145_cov_79.4649_ID_75339, whole genome shotgun sequence 24,145
NZ_PXOH01000050.1 Aphanothece hegewaldii CCALA 016 NODE_217_length_21612_cov_66.5205_ID_75377, whole genome shotgun sequence 21,612
NZ_PXOH01000051.1 Aphanothece hegewaldii CCALA 016 NODE_233_length_19077_cov_79.6142_ID_75401, whole genome shotgun sequence 19,077
NZ_PXOH01000052.1 Aphanothece hegewaldii CCALA 016 NODE_237_length_18424_cov_81.613_ID_75413, whole genome shotgun sequence 18,424
NZ_PXOH01000053.1 Aphanothece hegewaldii CCALA 016 NODE_263_length_14993_cov_74.5522_ID_75459, whole genome shotgun sequence 14,993
NZ_PXOH01000054.1 Aphanothece hegewaldii CCALA 016 NODE_268_length_14469_cov_50.8319_ID_75469, whole genome shotgun sequence 14,469
NZ_PXOH01000055.1 Aphanothece hegewaldii CCALA 016 NODE_286_length_13325_cov_58.72_ID_75493, whole genome shotgun sequence 13,325
NZ_PXOH01000056.1 Aphanothece hegewaldii CCALA 016 NODE_294_length_12630_cov_131.512_ID_75511, whole genome shotgun sequence 12,630
NZ_PXOH01000057.1 Aphanothece hegewaldii CCALA 016 NODE_305_length_12106_cov_40.6017_ID_75537, whole genome shotgun sequence 12,106
NZ_PXOH01000058.1 Aphanothece hegewaldii CCALA 016 NODE_309_length_11798_cov_52.4166_ID_75543, whole genome shotgun sequence 11,798
NZ_PXOH01000059.1 Aphanothece hegewaldii CCALA 016 NODE_320_length_11035_cov_51.1332_ID_75571, whole genome shotgun sequence 11,035
NZ_PXOH01000060.1 Aphanothece hegewaldii CCALA 016 NODE_321_length_11034_cov_71.0797_ID_75573, whole genome shotgun sequence 11,034
NZ_PXOH01000061.1 Aphanothece hegewaldii CCALA 016 NODE_338_length_10490_cov_67.7429_ID_75607, whole genome shotgun sequence 10,490
NZ_PXOH01000062.1 Aphanothece hegewaldii CCALA 016 NODE_342_length_10266_cov_68.886_ID_75613, whole genome shotgun sequence 10,266
NZ_PXOH01000063.1 Aphanothece hegewaldii CCALA 016 NODE_344_length_10239_cov_66.9043_ID_75615, whole genome shotgun sequence 10,239
NZ_PXOH01000064.1 Aphanothece hegewaldii CCALA 016 NODE_345_length_10212_cov_113.676_ID_75617, whole genome shotgun sequence 10,212
NZ_PXOH01000065.1 Aphanothece hegewaldii CCALA 016 NODE_351_length_9994_cov_69.0645_ID_75627, whole genome shotgun sequence 9,994
NZ_PXOH01000066.1 Aphanothece hegewaldii CCALA 016 NODE_370_length_8928_cov_288.942_ID_75671, whole genome shotgun sequence 8,928
NZ_PXOH01000067.1 Aphanothece hegewaldii CCALA 016 NODE_372_length_8810_cov_158.61_ID_75675, whole genome shotgun sequence 8,810
NZ_PXOH01000068.1 Aphanothece hegewaldii CCALA 016 NODE_377_length_8432_cov_70.6383_ID_75685, whole genome shotgun sequence 8,432
NZ_PXOH01000069.1 Aphanothece hegewaldii CCALA 016 NODE_380_length_8317_cov_77.1767_ID_75687, whole genome shotgun sequence 8,317
NZ_PXOH01000070.1 Aphanothece hegewaldii CCALA 016 NODE_397_length_7684_cov_78.95_ID_75717, whole genome shotgun sequence 7,684
NZ_PXOH01000071.1 Aphanothece hegewaldii CCALA 016 NODE_400_length_7369_cov_51.0805_ID_75719, whole genome shotgun sequence 7,369
NZ_PXOH01000072.1 Aphanothece hegewaldii CCALA 016 NODE_402_length_7251_cov_82.3439_ID_75723, whole genome shotgun sequence 7,251
NZ_PXOH01000073.1 Aphanothece hegewaldii CCALA 016 NODE_404_length_7207_cov_53.7334_ID_75727, whole genome shotgun sequence 7,207
NZ_PXOH01000074.1 Aphanothece hegewaldii CCALA 016 NODE_407_length_7061_cov_56.9718_ID_75733, whole genome shotgun sequence 7,061
NZ_PXOH01000075.1 Aphanothece hegewaldii CCALA 016 NODE_423_length_6531_cov_69.7037_ID_75755, whole genome shotgun sequence 6,531
NZ_PXOH01000076.1 Aphanothece hegewaldii CCALA 016 NODE_457_length_5340_cov_69.1036_ID_75805, whole genome shotgun sequence 5,340
NZ_PXOH01000077.1 Aphanothece hegewaldii CCALA 016 NODE_461_length_5256_cov_50.6233_ID_75811, whole genome shotgun sequence 5,256
NZ_PXOH01000078.1 Aphanothece hegewaldii CCALA 016 NODE_470_length_4804_cov_53.2001_ID_75821, whole genome shotgun sequence 4,804
NZ_PXOH01000079.1 Aphanothece hegewaldii CCALA 016 NODE_474_length_4636_cov_71.492_ID_75831, whole genome shotgun sequence 4,636
NZ_PXOH01000080.1 Aphanothece hegewaldii CCALA 016 NODE_489_length_4360_cov_50.4114_ID_75853, whole genome shotgun sequence 4,360
NZ_PXOH01000081.1 Aphanothece hegewaldii CCALA 016 NODE_491_length_4349_cov_284.359_ID_75855, whole genome shotgun sequence 4,349
NZ_PXOH01000082.1 Aphanothece hegewaldii CCALA 016 NODE_494_length_4278_cov_52.407_ID_75861, whole genome shotgun sequence 4,278
NZ_PXOH01000083.1 Aphanothece hegewaldii CCALA 016 NODE_519_length_3473_cov_87.3216_ID_75909, whole genome shotgun sequence 3,473
NZ_PXOH01000084.1 Aphanothece hegewaldii CCALA 016 NODE_528_length_3252_cov_110.45_ID_75931, whole genome shotgun sequence 3,252
NZ_PXOH01000085.1 Aphanothece hegewaldii CCALA 016 NODE_529_length_3236_cov_112.658_ID_75933, whole genome shotgun sequence 3,236
NZ_PXOH01000086.1 Aphanothece hegewaldii CCALA 016 NODE_531_length_3157_cov_69.576_ID_75937, whole genome shotgun sequence 3,157
NZ_PXOH01000087.1 Aphanothece hegewaldii CCALA 016 NODE_543_length_2675_cov_203.094_ID_75955, whole genome shotgun sequence 2,675
NZ_PXOH01000088.1 Aphanothece hegewaldii CCALA 016 NODE_561_length_2299_cov_1469.78_ID_75987, whole genome shotgun sequence 2,299
NZ_PXOH01000089.1 Aphanothece hegewaldii CCALA 016 NODE_562_length_2294_cov_222.658_ID_75989, whole genome shotgun sequence 2,294
NZ_PXOH01000090.1 Aphanothece hegewaldii CCALA 016 NODE_564_length_2226_cov_206.884_ID_75993, whole genome shotgun sequence 2,226
NZ_PXOH01000091.1 Aphanothece hegewaldii CCALA 016 NODE_565_length_2220_cov_204.933_ID_75995, whole genome shotgun sequence 2,220
NZ_PXOH01000092.1 Aphanothece hegewaldii CCALA 016 NODE_566_length_2212_cov_89.3981_ID_75997, whole genome shotgun sequence 2,212
NZ_PXOH01000093.1 Aphanothece hegewaldii CCALA 016 NODE_567_length_2194_cov_0.274445_ID_75999, whole genome shotgun sequence 2,118
NZ_PXOH01000094.1 Aphanothece hegewaldii CCALA 016 NODE_568_length_2192_cov_113.777_ID_76001, whole genome shotgun sequence 2,192
NZ_PXOH01000095.1 Aphanothece hegewaldii CCALA 016 NODE_577_length_1846_cov_76.0741_ID_76015, whole genome shotgun sequence 1,846
NZ_PXOH01000096.1 Aphanothece hegewaldii CCALA 016 NODE_579_length_1840_cov_134.539_ID_76017, whole genome shotgun sequence 1,840
NZ_PXOH01000097.1 Aphanothece hegewaldii CCALA 016 NODE_580_length_1835_cov_129.093_ID_76019, whole genome shotgun sequence 1,835
NZ_PXOH01000098.1 Aphanothece hegewaldii CCALA 016 NODE_582_length_1812_cov_0.609222_ID_76021, whole genome shotgun sequence 1,758
NZ_PXOH01000099.1 Aphanothece hegewaldii CCALA 016 NODE_585_length_1778_cov_138.375_ID_76025, whole genome shotgun sequence 1,778
NZ_PXOH01000100.1 Aphanothece hegewaldii CCALA 016 NODE_589_length_1716_cov_53.6876_ID_76031, whole genome shotgun sequence 1,716
NZ_PXOH01000101.1 Aphanothece hegewaldii CCALA 016 NODE_597_length_1601_cov_80.666_ID_76049, whole genome shotgun sequence 1,601
NZ_PXOH01000102.1 Aphanothece hegewaldii CCALA 016 NODE_601_length_1556_cov_605.185_ID_76057, whole genome shotgun sequence 1,556
NZ_PXOH01000103.1 Aphanothece hegewaldii CCALA 016 NODE_603_length_1544_cov_109.431_ID_76061, whole genome shotgun sequence 1,544
NZ_PXOH01000104.1 Aphanothece hegewaldii CCALA 016 NODE_605_length_1502_cov_53.4961_ID_76063, whole genome shotgun sequence 1,502
NZ_PXOH01000105.1 Aphanothece hegewaldii CCALA 016 NODE_609_length_1450_cov_435.724_ID_76071, whole genome shotgun sequence 1,450
NZ_PXOH01000106.1 Aphanothece hegewaldii CCALA 016 NODE_611_length_1427_cov_66.6252_ID_76075, whole genome shotgun sequence 1,427
NZ_PXOH01000107.1 Aphanothece hegewaldii CCALA 016 NODE_613_length_1393_cov_103.834_ID_76079, whole genome shotgun sequence 1,393
NZ_PXOH01000108.1 Aphanothece hegewaldii CCALA 016 NODE_618_length_1346_cov_92.7187_ID_76089, whole genome shotgun sequence 1,346
NZ_PXOH01000109.1 Aphanothece hegewaldii CCALA 016 NODE_620_length_1312_cov_1.2983_ID_76093, whole genome shotgun sequence 1,055
NZ_PXOH01000110.1 Aphanothece hegewaldii CCALA 016 NODE_625_length_1241_cov_74.1443_ID_76103, whole genome shotgun sequence 1,241
NZ_PXOH01000111.1 Aphanothece hegewaldii CCALA 016 NODE_629_length_1220_cov_135.372_ID_76111, whole genome shotgun sequence 1,220
NZ_PXOH01000112.1 Aphanothece hegewaldii CCALA 016 NODE_636_length_1160_cov_1512.29_ID_76123, whole genome shotgun sequence 1,160
NZ_PXOH01000113.1 Aphanothece hegewaldii CCALA 016 NODE_637_length_1151_cov_78.7402_ID_76125, whole genome shotgun sequence 1,151
NZ_PXOH01000114.1 Aphanothece hegewaldii CCALA 016 NODE_639_length_1134_cov_890.697_ID_76129, whole genome shotgun sequence 1,134
NZ_PXOH01000115.1 Aphanothece hegewaldii CCALA 016 NODE_640_length_1128_cov_84.3264_ID_76131, whole genome shotgun sequence 1,128
NZ_PXOH01000116.1 Aphanothece hegewaldii CCALA 016 NODE_641_length_1120_cov_123.44_ID_76133, whole genome shotgun sequence 1,120
NZ_PXOH01000117.1 Aphanothece hegewaldii CCALA 016 NODE_643_length_1078_cov_365.093_ID_76137, whole genome shotgun sequence 1,078
NZ_PXOH01000118.1 Aphanothece hegewaldii CCALA 016 NODE_644_length_1062_cov_108.291_ID_76139, whole genome shotgun sequence 1,062
NZ_PXOH01000119.1 Aphanothece hegewaldii CCALA 016 NODE_649_length_1017_cov_72.5043_ID_76149, whole genome shotgun sequence 1,017
NZ_PXOH01000120.1 Aphanothece hegewaldii CCALA 016 NODE_652_length_1008_cov_140.787_ID_76155, whole genome shotgun sequence 1,008

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory