fast.genomicscompare 6,575 genera of bacteria & archaea

 

Mesorhizobium_D ephedrae 6GN-30

Genome identifier: GCF_003012745.1

NCBI assembly name: ASM301274v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Mesorhizobium_D, Mesorhizobium_D ephedrae

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Phyllobacteriaceae, Mesorhizobium, Mesorhizobium ephedrae

Scaffolds: 115

Genes: 5,898 Protein-coding: 5,742 RNAs: 56 pseudogenes: 100

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_PXYK01000001.1 Mesorhizobium ephedrae strain 6GN-30 ZB100000, whole genome shotgun sequence 355,111
NZ_PXYK01000002.1 Mesorhizobium ephedrae strain 6GN-30 ZB100001, whole genome shotgun sequence 312,631
NZ_PXYK01000003.1 Mesorhizobium ephedrae strain 6GN-30 ZB100002, whole genome shotgun sequence 311,663
NZ_PXYK01000004.1 Mesorhizobium ephedrae strain 6GN-30 ZB100003, whole genome shotgun sequence 310,394
NZ_PXYK01000005.1 Mesorhizobium ephedrae strain 6GN-30 ZB100004, whole genome shotgun sequence 282,433
NZ_PXYK01000006.1 Mesorhizobium ephedrae strain 6GN-30 ZB100005, whole genome shotgun sequence 262,937
NZ_PXYK01000007.1 Mesorhizobium ephedrae strain 6GN-30 ZB100006, whole genome shotgun sequence 233,076
NZ_PXYK01000008.1 Mesorhizobium ephedrae strain 6GN-30 ZB100007, whole genome shotgun sequence 191,279
NZ_PXYK01000009.1 Mesorhizobium ephedrae strain 6GN-30 ZB100008, whole genome shotgun sequence 189,022
NZ_PXYK01000010.1 Mesorhizobium ephedrae strain 6GN-30 ZB100009, whole genome shotgun sequence 184,704
NZ_PXYK01000011.1 Mesorhizobium ephedrae strain 6GN-30 ZB100010, whole genome shotgun sequence 184,702
NZ_PXYK01000012.1 Mesorhizobium ephedrae strain 6GN-30 ZB100011, whole genome shotgun sequence 182,160
NZ_PXYK01000013.1 Mesorhizobium ephedrae strain 6GN-30 ZB100012, whole genome shotgun sequence 165,777
NZ_PXYK01000014.1 Mesorhizobium ephedrae strain 6GN-30 ZB100013, whole genome shotgun sequence 161,951
NZ_PXYK01000015.1 Mesorhizobium ephedrae strain 6GN-30 ZB100014, whole genome shotgun sequence 147,871
NZ_PXYK01000016.1 Mesorhizobium ephedrae strain 6GN-30 ZB100015, whole genome shotgun sequence 146,981
NZ_PXYK01000017.1 Mesorhizobium ephedrae strain 6GN-30 ZB100016, whole genome shotgun sequence 144,686
NZ_PXYK01000018.1 Mesorhizobium ephedrae strain 6GN-30 ZB100017, whole genome shotgun sequence 142,504
NZ_PXYK01000019.1 Mesorhizobium ephedrae strain 6GN-30 ZB100018, whole genome shotgun sequence 140,930
NZ_PXYK01000020.1 Mesorhizobium ephedrae strain 6GN-30 ZB100019, whole genome shotgun sequence 140,496
NZ_PXYK01000021.1 Mesorhizobium ephedrae strain 6GN-30 ZB100020, whole genome shotgun sequence 125,280
NZ_PXYK01000022.1 Mesorhizobium ephedrae strain 6GN-30 ZB100021, whole genome shotgun sequence 118,005
NZ_PXYK01000023.1 Mesorhizobium ephedrae strain 6GN-30 ZB100022, whole genome shotgun sequence 95,038
NZ_PXYK01000024.1 Mesorhizobium ephedrae strain 6GN-30 ZB100023, whole genome shotgun sequence 90,324
NZ_PXYK01000025.1 Mesorhizobium ephedrae strain 6GN-30 ZB100024, whole genome shotgun sequence 88,176
NZ_PXYK01000026.1 Mesorhizobium ephedrae strain 6GN-30 ZB100025, whole genome shotgun sequence 83,483
NZ_PXYK01000027.1 Mesorhizobium ephedrae strain 6GN-30 ZB100026, whole genome shotgun sequence 80,130
NZ_PXYK01000028.1 Mesorhizobium ephedrae strain 6GN-30 ZB100027, whole genome shotgun sequence 79,661
NZ_PXYK01000029.1 Mesorhizobium ephedrae strain 6GN-30 ZB100028, whole genome shotgun sequence 78,341
NZ_PXYK01000030.1 Mesorhizobium ephedrae strain 6GN-30 ZB100029, whole genome shotgun sequence 76,648
NZ_PXYK01000031.1 Mesorhizobium ephedrae strain 6GN-30 ZB100030, whole genome shotgun sequence 76,493
NZ_PXYK01000032.1 Mesorhizobium ephedrae strain 6GN-30 ZB100031, whole genome shotgun sequence 74,287
NZ_PXYK01000033.1 Mesorhizobium ephedrae strain 6GN-30 ZB100032, whole genome shotgun sequence 61,475
NZ_PXYK01000034.1 Mesorhizobium ephedrae strain 6GN-30 ZB100033, whole genome shotgun sequence 58,856
NZ_PXYK01000035.1 Mesorhizobium ephedrae strain 6GN-30 ZB100034, whole genome shotgun sequence 56,315
NZ_PXYK01000036.1 Mesorhizobium ephedrae strain 6GN-30 ZB100035, whole genome shotgun sequence 52,856
NZ_PXYK01000037.1 Mesorhizobium ephedrae strain 6GN-30 ZB100036, whole genome shotgun sequence 52,424
NZ_PXYK01000038.1 Mesorhizobium ephedrae strain 6GN-30 ZB100037, whole genome shotgun sequence 50,037
NZ_PXYK01000039.1 Mesorhizobium ephedrae strain 6GN-30 ZB100038, whole genome shotgun sequence 45,836
NZ_PXYK01000040.1 Mesorhizobium ephedrae strain 6GN-30 ZB100039, whole genome shotgun sequence 40,105
NZ_PXYK01000041.1 Mesorhizobium ephedrae strain 6GN-30 ZB100040, whole genome shotgun sequence 36,987
NZ_PXYK01000042.1 Mesorhizobium ephedrae strain 6GN-30 ZB100041, whole genome shotgun sequence 33,712
NZ_PXYK01000043.1 Mesorhizobium ephedrae strain 6GN-30 ZB100042, whole genome shotgun sequence 31,960
NZ_PXYK01000044.1 Mesorhizobium ephedrae strain 6GN-30 ZB100043, whole genome shotgun sequence 31,792
NZ_PXYK01000045.1 Mesorhizobium ephedrae strain 6GN-30 ZB100044, whole genome shotgun sequence 30,494
NZ_PXYK01000046.1 Mesorhizobium ephedrae strain 6GN-30 ZB100045, whole genome shotgun sequence 30,114
NZ_PXYK01000047.1 Mesorhizobium ephedrae strain 6GN-30 ZB100046, whole genome shotgun sequence 29,339
NZ_PXYK01000048.1 Mesorhizobium ephedrae strain 6GN-30 ZB100047, whole genome shotgun sequence 25,923
NZ_PXYK01000049.1 Mesorhizobium ephedrae strain 6GN-30 ZB100048, whole genome shotgun sequence 19,332
NZ_PXYK01000050.1 Mesorhizobium ephedrae strain 6GN-30 ZB100049, whole genome shotgun sequence 19,000
NZ_PXYK01000051.1 Mesorhizobium ephedrae strain 6GN-30 ZB100050, whole genome shotgun sequence 18,397
NZ_PXYK01000052.1 Mesorhizobium ephedrae strain 6GN-30 ZB100051, whole genome shotgun sequence 14,838
NZ_PXYK01000053.1 Mesorhizobium ephedrae strain 6GN-30 ZB100052, whole genome shotgun sequence 14,462
NZ_PXYK01000054.1 Mesorhizobium ephedrae strain 6GN-30 ZB100053, whole genome shotgun sequence 11,624
NZ_PXYK01000055.1 Mesorhizobium ephedrae strain 6GN-30 ZB100054, whole genome shotgun sequence 11,489
NZ_PXYK01000056.1 Mesorhizobium ephedrae strain 6GN-30 ZB100055, whole genome shotgun sequence 11,290
NZ_PXYK01000057.1 Mesorhizobium ephedrae strain 6GN-30 ZB100056, whole genome shotgun sequence 9,094
NZ_PXYK01000058.1 Mesorhizobium ephedrae strain 6GN-30 ZB100057, whole genome shotgun sequence 6,084
NZ_PXYK01000059.1 Mesorhizobium ephedrae strain 6GN-30 ZB100058, whole genome shotgun sequence 6,078
NZ_PXYK01000060.1 Mesorhizobium ephedrae strain 6GN-30 ZB100059, whole genome shotgun sequence 6,039
NZ_PXYK01000061.1 Mesorhizobium ephedrae strain 6GN-30 ZB100060, whole genome shotgun sequence 3,884
NZ_PXYK01000062.1 Mesorhizobium ephedrae strain 6GN-30 ZB100061, whole genome shotgun sequence 2,491
NZ_PXYK01000063.1 Mesorhizobium ephedrae strain 6GN-30 ZB100062, whole genome shotgun sequence 2,368
NZ_PXYK01000064.1 Mesorhizobium ephedrae strain 6GN-30 ZB100063, whole genome shotgun sequence 2,076
NZ_PXYK01000065.1 Mesorhizobium ephedrae strain 6GN-30 ZB100064, whole genome shotgun sequence 1,944
NZ_PXYK01000066.1 Mesorhizobium ephedrae strain 6GN-30 ZB100065, whole genome shotgun sequence 1,866
NZ_PXYK01000067.1 Mesorhizobium ephedrae strain 6GN-30 ZB100066, whole genome shotgun sequence 1,841
NZ_PXYK01000068.1 Mesorhizobium ephedrae strain 6GN-30 ZB100067, whole genome shotgun sequence 1,405
NZ_PXYK01000069.1 Mesorhizobium ephedrae strain 6GN-30 ZB100068, whole genome shotgun sequence 1,310
NZ_PXYK01000070.1 Mesorhizobium ephedrae strain 6GN-30 ZB100069, whole genome shotgun sequence 1,252
NZ_PXYK01000071.1 Mesorhizobium ephedrae strain 6GN-30 ZB100070, whole genome shotgun sequence 1,052
NZ_PXYK01000072.1 Mesorhizobium ephedrae strain 6GN-30 ZB100071, whole genome shotgun sequence 1,021
NZ_PXYK01000073.1 Mesorhizobium ephedrae strain 6GN-30 ZB100072, whole genome shotgun sequence 953
NZ_PXYK01000074.1 Mesorhizobium ephedrae strain 6GN-30 ZB100073, whole genome shotgun sequence 926
NZ_PXYK01000075.1 Mesorhizobium ephedrae strain 6GN-30 ZB100074, whole genome shotgun sequence 904
NZ_PXYK01000076.1 Mesorhizobium ephedrae strain 6GN-30 ZB100075, whole genome shotgun sequence 898
NZ_PXYK01000077.1 Mesorhizobium ephedrae strain 6GN-30 ZB100076, whole genome shotgun sequence 884
NZ_PXYK01000078.1 Mesorhizobium ephedrae strain 6GN-30 ZB100077, whole genome shotgun sequence 701
NZ_PXYK01000079.1 Mesorhizobium ephedrae strain 6GN-30 ZB100078, whole genome shotgun sequence 567
NZ_PXYK01000080.1 Mesorhizobium ephedrae strain 6GN-30 ZB100079, whole genome shotgun sequence 539
NZ_PXYK01000081.1 Mesorhizobium ephedrae strain 6GN-30 ZB100080, whole genome shotgun sequence 514
NZ_PXYK01000082.1 Mesorhizobium ephedrae strain 6GN-30 ZB100081, whole genome shotgun sequence 483
NZ_PXYK01000083.1 Mesorhizobium ephedrae strain 6GN-30 ZB100083, whole genome shotgun sequence 382
NZ_PXYK01000084.1 Mesorhizobium ephedrae strain 6GN-30 ZB100084, whole genome shotgun sequence 380
NZ_PXYK01000085.1 Mesorhizobium ephedrae strain 6GN-30 ZB100085, whole genome shotgun sequence 357
NZ_PXYK01000086.1 Mesorhizobium ephedrae strain 6GN-30 ZB100086, whole genome shotgun sequence 353
NZ_PXYK01000087.1 Mesorhizobium ephedrae strain 6GN-30 ZB100087, whole genome shotgun sequence 348
NZ_PXYK01000088.1 Mesorhizobium ephedrae strain 6GN-30 ZB100088, whole genome shotgun sequence 327
NZ_PXYK01000089.1 Mesorhizobium ephedrae strain 6GN-30 ZB100089, whole genome shotgun sequence 320
NZ_PXYK01000090.1 Mesorhizobium ephedrae strain 6GN-30 ZB100090, whole genome shotgun sequence 317
NZ_PXYK01000091.1 Mesorhizobium ephedrae strain 6GN-30 ZB100091, whole genome shotgun sequence 302
NZ_PXYK01000092.1 Mesorhizobium ephedrae strain 6GN-30 ZB100092, whole genome shotgun sequence 302
NZ_PXYK01000093.1 Mesorhizobium ephedrae strain 6GN-30 ZB100093, whole genome shotgun sequence 299
NZ_PXYK01000094.1 Mesorhizobium ephedrae strain 6GN-30 ZB100094, whole genome shotgun sequence 291
NZ_PXYK01000095.1 Mesorhizobium ephedrae strain 6GN-30 ZB100095, whole genome shotgun sequence 277
NZ_PXYK01000096.1 Mesorhizobium ephedrae strain 6GN-30 ZB100096, whole genome shotgun sequence 267
NZ_PXYK01000097.1 Mesorhizobium ephedrae strain 6GN-30 ZB100097, whole genome shotgun sequence 266
NZ_PXYK01000098.1 Mesorhizobium ephedrae strain 6GN-30 ZB100098, whole genome shotgun sequence 255
NZ_PXYK01000099.1 Mesorhizobium ephedrae strain 6GN-30 ZB100099, whole genome shotgun sequence 255
NZ_PXYK01000100.1 Mesorhizobium ephedrae strain 6GN-30 ZB100100, whole genome shotgun sequence 255
NZ_PXYK01000101.1 Mesorhizobium ephedrae strain 6GN-30 ZB100102, whole genome shotgun sequence 255
NZ_PXYK01000102.1 Mesorhizobium ephedrae strain 6GN-30 ZB100103, whole genome shotgun sequence 252
NZ_PXYK01000103.1 Mesorhizobium ephedrae strain 6GN-30 ZB100104, whole genome shotgun sequence 251
NZ_PXYK01000104.1 Mesorhizobium ephedrae strain 6GN-30 ZB100105, whole genome shotgun sequence 251
NZ_PXYK01000105.1 Mesorhizobium ephedrae strain 6GN-30 ZB100106, whole genome shotgun sequence 250
NZ_PXYK01000106.1 Mesorhizobium ephedrae strain 6GN-30 ZB100107, whole genome shotgun sequence 249
NZ_PXYK01000107.1 Mesorhizobium ephedrae strain 6GN-30 ZB100108, whole genome shotgun sequence 248
NZ_PXYK01000108.1 Mesorhizobium ephedrae strain 6GN-30 ZB100109, whole genome shotgun sequence 247
NZ_PXYK01000109.1 Mesorhizobium ephedrae strain 6GN-30 ZB100110, whole genome shotgun sequence 247
NZ_PXYK01000110.1 Mesorhizobium ephedrae strain 6GN-30 ZB100111, whole genome shotgun sequence 247
NZ_PXYK01000111.1 Mesorhizobium ephedrae strain 6GN-30 ZB100112, whole genome shotgun sequence 246
NZ_PXYK01000112.1 Mesorhizobium ephedrae strain 6GN-30 ZB100113, whole genome shotgun sequence 246
NZ_PXYK01000113.1 Mesorhizobium ephedrae strain 6GN-30 ZB100114, whole genome shotgun sequence 246
NZ_PXYK01000114.1 Mesorhizobium ephedrae strain 6GN-30 ZB100115, whole genome shotgun sequence 245
NZ_PXYK01000115.1 Mesorhizobium ephedrae strain 6GN-30 ZB100116, whole genome shotgun sequence 235

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory