fast.genomicscompare 6,575 genera of bacteria & archaea

 

Duncaniella muris DSM 103720

Genome identifier: GCF_003024805.1

NCBI assembly name: ASM302480v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Muribaculaceae, Duncaniella, Duncaniella muris

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Muribaculaceae, Duncaniella, Duncaniella muris

Scaffolds: 80

Genes: 2,793 Protein-coding: 2,690 RNAs: 58 pseudogenes: 45

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_PUEC01000001.1 Duncaniella muris strain DSM 103720 seq1, whole genome shotgun sequence 195,595
NZ_PUEC01000002.1 Duncaniella muris strain DSM 103720 seq2, whole genome shotgun sequence 193,318
NZ_PUEC01000003.1 Duncaniella muris strain DSM 103720 seq3, whole genome shotgun sequence 191,710
NZ_PUEC01000004.1 Duncaniella muris strain DSM 103720 seq4, whole genome shotgun sequence 181,787
NZ_PUEC01000005.1 Duncaniella muris strain DSM 103720 seq5, whole genome shotgun sequence 125,384
NZ_PUEC01000006.1 Duncaniella muris strain DSM 103720 seq6, whole genome shotgun sequence 109,279
NZ_PUEC01000007.1 Duncaniella muris strain DSM 103720 seq7, whole genome shotgun sequence 102,174
NZ_PUEC01000008.1 Duncaniella muris strain DSM 103720 seq8, whole genome shotgun sequence 101,244
NZ_PUEC01000009.1 Duncaniella muris strain DSM 103720 seq9, whole genome shotgun sequence 99,678
NZ_PUEC01000010.1 Duncaniella muris strain DSM 103720 seq10, whole genome shotgun sequence 99,032
NZ_PUEC01000011.1 Duncaniella muris strain DSM 103720 seq11, whole genome shotgun sequence 96,045
NZ_PUEC01000012.1 Duncaniella muris strain DSM 103720 seq12, whole genome shotgun sequence 95,499
NZ_PUEC01000013.1 Duncaniella muris strain DSM 103720 seq13, whole genome shotgun sequence 93,062
NZ_PUEC01000014.1 Duncaniella muris strain DSM 103720 seq14, whole genome shotgun sequence 91,682
NZ_PUEC01000015.1 Duncaniella muris strain DSM 103720 seq15, whole genome shotgun sequence 85,465
NZ_PUEC01000016.1 Duncaniella muris strain DSM 103720 seq16, whole genome shotgun sequence 83,130
NZ_PUEC01000017.1 Duncaniella muris strain DSM 103720 seq17, whole genome shotgun sequence 79,865
NZ_PUEC01000018.1 Duncaniella muris strain DSM 103720 seq18, whole genome shotgun sequence 76,496
NZ_PUEC01000019.1 Duncaniella muris strain DSM 103720 seq19, whole genome shotgun sequence 69,727
NZ_PUEC01000020.1 Duncaniella muris strain DSM 103720 seq20, whole genome shotgun sequence 67,745
NZ_PUEC01000021.1 Duncaniella muris strain DSM 103720 seq21, whole genome shotgun sequence 66,584
NZ_PUEC01000022.1 Duncaniella muris strain DSM 103720 seq22, whole genome shotgun sequence 62,118
NZ_PUEC01000023.1 Duncaniella muris strain DSM 103720 seq23, whole genome shotgun sequence 58,245
NZ_PUEC01000024.1 Duncaniella muris strain DSM 103720 seq24, whole genome shotgun sequence 49,935
NZ_PUEC01000025.1 Duncaniella muris strain DSM 103720 seq25, whole genome shotgun sequence 49,540
NZ_PUEC01000026.1 Duncaniella muris strain DSM 103720 seq26, whole genome shotgun sequence 48,611
NZ_PUEC01000027.1 Duncaniella muris strain DSM 103720 seq27, whole genome shotgun sequence 47,629
NZ_PUEC01000028.1 Duncaniella muris strain DSM 103720 seq28, whole genome shotgun sequence 47,542
NZ_PUEC01000029.1 Duncaniella muris strain DSM 103720 seq29, whole genome shotgun sequence 44,568
NZ_PUEC01000030.1 Duncaniella muris strain DSM 103720 seq30, whole genome shotgun sequence 38,123
NZ_PUEC01000031.1 Duncaniella muris strain DSM 103720 seq31, whole genome shotgun sequence 33,618
NZ_PUEC01000032.1 Duncaniella muris strain DSM 103720 seq32, whole genome shotgun sequence 32,079
NZ_PUEC01000033.1 Duncaniella muris strain DSM 103720 seq33, whole genome shotgun sequence 26,277
NZ_PUEC01000034.1 Duncaniella muris strain DSM 103720 seq34, whole genome shotgun sequence 25,226
NZ_PUEC01000035.1 Duncaniella muris strain DSM 103720 seq35, whole genome shotgun sequence 23,559
NZ_PUEC01000036.1 Duncaniella muris strain DSM 103720 seq36, whole genome shotgun sequence 20,910
NZ_PUEC01000037.1 Duncaniella muris strain DSM 103720 seq37, whole genome shotgun sequence 20,809
NZ_PUEC01000038.1 Duncaniella muris strain DSM 103720 seq38, whole genome shotgun sequence 20,664
NZ_PUEC01000039.1 Duncaniella muris strain DSM 103720 seq39, whole genome shotgun sequence 20,323
NZ_PUEC01000040.1 Duncaniella muris strain DSM 103720 seq40, whole genome shotgun sequence 20,309
NZ_PUEC01000041.1 Duncaniella muris strain DSM 103720 seq41, whole genome shotgun sequence 19,948
NZ_PUEC01000042.1 Duncaniella muris strain DSM 103720 seq42, whole genome shotgun sequence 19,854
NZ_PUEC01000043.1 Duncaniella muris strain DSM 103720 seq43, whole genome shotgun sequence 19,138
NZ_PUEC01000044.1 Duncaniella muris strain DSM 103720 seq44, whole genome shotgun sequence 18,512
NZ_PUEC01000045.1 Duncaniella muris strain DSM 103720 seq45, whole genome shotgun sequence 17,836
NZ_PUEC01000046.1 Duncaniella muris strain DSM 103720 seq46, whole genome shotgun sequence 16,285
NZ_PUEC01000047.1 Duncaniella muris strain DSM 103720 seq47, whole genome shotgun sequence 15,641
NZ_PUEC01000048.1 Duncaniella muris strain DSM 103720 seq48, whole genome shotgun sequence 13,933
NZ_PUEC01000049.1 Duncaniella muris strain DSM 103720 seq49, whole genome shotgun sequence 13,843
NZ_PUEC01000050.1 Duncaniella muris strain DSM 103720 seq50, whole genome shotgun sequence 11,043
NZ_PUEC01000051.1 Duncaniella muris strain DSM 103720 seq51, whole genome shotgun sequence 10,770
NZ_PUEC01000052.1 Duncaniella muris strain DSM 103720 seq52, whole genome shotgun sequence 8,263
NZ_PUEC01000053.1 Duncaniella muris strain DSM 103720 seq53, whole genome shotgun sequence 8,114
NZ_PUEC01000054.1 Duncaniella muris strain DSM 103720 seq54, whole genome shotgun sequence 7,485
NZ_PUEC01000055.1 Duncaniella muris strain DSM 103720 seq55, whole genome shotgun sequence 7,143
NZ_PUEC01000056.1 Duncaniella muris strain DSM 103720 seq56, whole genome shotgun sequence 5,957
NZ_PUEC01000057.1 Duncaniella muris strain DSM 103720 seq57, whole genome shotgun sequence 5,771
NZ_PUEC01000058.1 Duncaniella muris strain DSM 103720 seq58, whole genome shotgun sequence 5,296
NZ_PUEC01000059.1 Duncaniella muris strain DSM 103720 seq59, whole genome shotgun sequence 4,634
NZ_PUEC01000060.1 Duncaniella muris strain DSM 103720 seq60, whole genome shotgun sequence 4,417
NZ_PUEC01000061.1 Duncaniella muris strain DSM 103720 seq61, whole genome shotgun sequence 4,413
NZ_PUEC01000062.1 Duncaniella muris strain DSM 103720 seq62, whole genome shotgun sequence 4,082
NZ_PUEC01000063.1 Duncaniella muris strain DSM 103720 seq63, whole genome shotgun sequence 3,105
NZ_PUEC01000064.1 Duncaniella muris strain DSM 103720 seq64, whole genome shotgun sequence 3,025
NZ_PUEC01000065.1 Duncaniella muris strain DSM 103720 seq65, whole genome shotgun sequence 2,791
NZ_PUEC01000066.1 Duncaniella muris strain DSM 103720 seq66, whole genome shotgun sequence 2,675
NZ_PUEC01000067.1 Duncaniella muris strain DSM 103720 seq67, whole genome shotgun sequence 2,274
NZ_PUEC01000068.1 Duncaniella muris strain DSM 103720 seq68, whole genome shotgun sequence 1,796
NZ_PUEC01000069.1 Duncaniella muris strain DSM 103720 seq69, whole genome shotgun sequence 1,761
NZ_PUEC01000070.1 Duncaniella muris strain DSM 103720 seq70, whole genome shotgun sequence 1,668
NZ_PUEC01000071.1 Duncaniella muris strain DSM 103720 seq72, whole genome shotgun sequence 1,636
NZ_PUEC01000072.1 Duncaniella muris strain DSM 103720 seq73, whole genome shotgun sequence 1,376
NZ_PUEC01000073.1 Duncaniella muris strain DSM 103720 seq74, whole genome shotgun sequence 1,372
NZ_PUEC01000074.1 Duncaniella muris strain DSM 103720 seq75, whole genome shotgun sequence 1,355
NZ_PUEC01000075.1 Duncaniella muris strain DSM 103720 seq76, whole genome shotgun sequence 1,301
NZ_PUEC01000076.1 Duncaniella muris strain DSM 103720 seq78, whole genome shotgun sequence 1,171
NZ_PUEC01000077.1 Duncaniella muris strain DSM 103720 seq79, whole genome shotgun sequence 1,162
NZ_PUEC01000078.1 Duncaniella muris strain DSM 103720 seq80, whole genome shotgun sequence 1,126
NZ_PUEC01000079.1 Duncaniella muris strain DSM 103720 seq81, whole genome shotgun sequence 1,118
NZ_PUEC01000080.1 Duncaniella muris strain DSM 103720 seq82, whole genome shotgun sequence 1,114

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory