fast.genomicscompare 6,575 genera of bacteria & archaea

 

Phreatobacter oligotrophus DSM 25521

Genome identifier: GCF_003046185.1

NCBI assembly name: ASM304618v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Phreatobacteraceae, Phreatobacter, Phreatobacter oligotrophus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Phreatobacteraceae, Phreatobacter, Phreatobacter oligotrophus

Scaffolds: 66

Genes: 4,726 Protein-coding: 4,607 RNAs: 56 pseudogenes: 63

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_PZZL01000001.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_101, whole genome shotgun sequence 789,221
NZ_PZZL01000002.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_102, whole genome shotgun sequence 679,383
NZ_PZZL01000003.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_103, whole genome shotgun sequence 554,945
NZ_PZZL01000004.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_104, whole genome shotgun sequence 527,128
NZ_PZZL01000005.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_105, whole genome shotgun sequence 457,675
NZ_PZZL01000006.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_106, whole genome shotgun sequence 255,906
NZ_PZZL01000007.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_107, whole genome shotgun sequence 237,849
NZ_PZZL01000008.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_108, whole genome shotgun sequence 219,754
NZ_PZZL01000009.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_109, whole genome shotgun sequence 211,339
NZ_PZZL01000010.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_110, whole genome shotgun sequence 184,943
NZ_PZZL01000011.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_111, whole genome shotgun sequence 68,556
NZ_PZZL01000012.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_112, whole genome shotgun sequence 57,005
NZ_PZZL01000013.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_113, whole genome shotgun sequence 50,394
NZ_PZZL01000014.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_114, whole genome shotgun sequence 41,895
NZ_PZZL01000015.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_115, whole genome shotgun sequence 38,623
NZ_PZZL01000016.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_116, whole genome shotgun sequence 38,204
NZ_PZZL01000017.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_117, whole genome shotgun sequence 31,257
NZ_PZZL01000018.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_118, whole genome shotgun sequence 31,199
NZ_PZZL01000019.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_119, whole genome shotgun sequence 29,942
NZ_PZZL01000020.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_120, whole genome shotgun sequence 26,838
NZ_PZZL01000021.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_121, whole genome shotgun sequence 25,384
NZ_PZZL01000022.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_122, whole genome shotgun sequence 24,118
NZ_PZZL01000023.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_123, whole genome shotgun sequence 23,094
NZ_PZZL01000024.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_124, whole genome shotgun sequence 19,476
NZ_PZZL01000025.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_125, whole genome shotgun sequence 19,226
NZ_PZZL01000026.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_126, whole genome shotgun sequence 15,732
NZ_PZZL01000027.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_127, whole genome shotgun sequence 14,816
NZ_PZZL01000028.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_128, whole genome shotgun sequence 14,806
NZ_PZZL01000029.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_129, whole genome shotgun sequence 14,443
NZ_PZZL01000030.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_130, whole genome shotgun sequence 14,379
NZ_PZZL01000031.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_131, whole genome shotgun sequence 12,765
NZ_PZZL01000032.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_132, whole genome shotgun sequence 11,758
NZ_PZZL01000033.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_133, whole genome shotgun sequence 11,542
NZ_PZZL01000034.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_134, whole genome shotgun sequence 10,029
NZ_PZZL01000035.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_135, whole genome shotgun sequence 9,649
NZ_PZZL01000036.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_136, whole genome shotgun sequence 9,454
NZ_PZZL01000037.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_137, whole genome shotgun sequence 7,612
NZ_PZZL01000038.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_138, whole genome shotgun sequence 6,303
NZ_PZZL01000039.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_139, whole genome shotgun sequence 5,669
NZ_PZZL01000040.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_140, whole genome shotgun sequence 5,635
NZ_PZZL01000041.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_141, whole genome shotgun sequence 5,561
NZ_PZZL01000042.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_142, whole genome shotgun sequence 5,373
NZ_PZZL01000043.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_143, whole genome shotgun sequence 5,212
NZ_PZZL01000044.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_144, whole genome shotgun sequence 4,259
NZ_PZZL01000045.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_145, whole genome shotgun sequence 3,725
NZ_PZZL01000046.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_146, whole genome shotgun sequence 3,711
NZ_PZZL01000047.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_147, whole genome shotgun sequence 3,602
NZ_PZZL01000048.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_148, whole genome shotgun sequence 3,234
NZ_PZZL01000049.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_149, whole genome shotgun sequence 3,232
NZ_PZZL01000050.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_150, whole genome shotgun sequence 3,162
NZ_PZZL01000051.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_151, whole genome shotgun sequence 3,061
NZ_PZZL01000052.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_152, whole genome shotgun sequence 2,955
NZ_PZZL01000053.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_153, whole genome shotgun sequence 2,754
NZ_PZZL01000054.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_154, whole genome shotgun sequence 2,491
NZ_PZZL01000055.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_155, whole genome shotgun sequence 2,477
NZ_PZZL01000056.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_156, whole genome shotgun sequence 2,448
NZ_PZZL01000057.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_157, whole genome shotgun sequence 2,406
NZ_PZZL01000058.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_158, whole genome shotgun sequence 2,213
NZ_PZZL01000059.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_159, whole genome shotgun sequence 2,283
NZ_PZZL01000060.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_160, whole genome shotgun sequence 1,370
NZ_PZZL01000061.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_161, whole genome shotgun sequence 1,322
NZ_PZZL01000062.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_162, whole genome shotgun sequence 1,257
NZ_PZZL01000063.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_163, whole genome shotgun sequence 1,194
NZ_PZZL01000064.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_164, whole genome shotgun sequence 1,150
NZ_PZZL01000065.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_165, whole genome shotgun sequence 1,118
NZ_PZZL01000066.1 Phreatobacter oligotrophus strain DSM 25521 Ga0183455_166, whole genome shotgun sequence 1,026

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory