fast.genomicscompare 6,575 genera of bacteria & archaea

 

Algibacter_B marinivivus ZY111

Genome identifier: GCF_003143755.1

NCBI assembly name: ASM314375v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Algibacter_B, Algibacter_B marinivivus

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Algibacter, Algibacter marinivivus

Scaffolds: 11

Genes: 2,983 Protein-coding: 2,927 RNAs: 45 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QFRI01000001.1 Algibacter marinivivus strain ZY111 conting1, whole genome shotgun sequence 1,892,538
NZ_QFRI01000002.1 Algibacter marinivivus strain ZY111 conting2, whole genome shotgun sequence 714,669
NZ_QFRI01000003.1 Algibacter marinivivus strain ZY111 conting3, whole genome shotgun sequence 319,673
NZ_QFRI01000004.1 Algibacter marinivivus strain ZY111 conting4, whole genome shotgun sequence 257,797
NZ_QFRI01000005.1 Algibacter marinivivus strain ZY111 conting5, whole genome shotgun sequence 123,896
NZ_QFRI01000006.1 Algibacter marinivivus strain ZY111 conting6, whole genome shotgun sequence 8,540
NZ_QFRI01000007.1 Algibacter marinivivus strain ZY111 conting7, whole genome shotgun sequence 7,349
NZ_QFRI01000008.1 Algibacter marinivivus strain ZY111 conting8, whole genome shotgun sequence 6,890
NZ_QFRI01000009.1 Algibacter marinivivus strain ZY111 conting9, whole genome shotgun sequence 6,565
NZ_QFRI01000010.1 Algibacter marinivivus strain ZY111 conting10, whole genome shotgun sequence 1,452
NZ_QFRI01000011.1 Algibacter marinivivus strain ZY111 conting11, whole genome shotgun sequence 600

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory