fast.genomicscompare 6,575 genera of bacteria & archaea

 

Mesorhizobium loti DSM 2626

Genome identifier: GCF_003148495.1

NCBI assembly name: ASM314849v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Mesorhizobium, Mesorhizobium loti

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Phyllobacteriaceae, Mesorhizobium, Mesorhizobium loti

Scaffolds: 52

Genes: 7,377 Protein-coding: 7,091 RNAs: 64 pseudogenes: 222

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QGGH01000001.1 Mesorhizobium loti strain DSM 2626 Ga0215673_101, whole genome shotgun sequence 1,700,593
NZ_QGGH01000002.1 Mesorhizobium loti strain DSM 2626 Ga0215673_102, whole genome shotgun sequence 1,007,649
NZ_QGGH01000003.1 Mesorhizobium loti strain DSM 2626 Ga0215673_103, whole genome shotgun sequence 701,239
NZ_QGGH01000004.1 Mesorhizobium loti strain DSM 2626 Ga0215673_104, whole genome shotgun sequence 607,128
NZ_QGGH01000005.1 Mesorhizobium loti strain DSM 2626 Ga0215673_105, whole genome shotgun sequence 417,091
NZ_QGGH01000006.1 Mesorhizobium loti strain DSM 2626 Ga0215673_106, whole genome shotgun sequence 360,114
NZ_QGGH01000007.1 Mesorhizobium loti strain DSM 2626 Ga0215673_107, whole genome shotgun sequence 275,574
NZ_QGGH01000008.1 Mesorhizobium loti strain DSM 2626 Ga0215673_108, whole genome shotgun sequence 203,090
NZ_QGGH01000009.1 Mesorhizobium loti strain DSM 2626 Ga0215673_109, whole genome shotgun sequence 195,725
NZ_QGGH01000010.1 Mesorhizobium loti strain DSM 2626 Ga0215673_110, whole genome shotgun sequence 181,045
NZ_QGGH01000011.1 Mesorhizobium loti strain DSM 2626 Ga0215673_111, whole genome shotgun sequence 174,847
NZ_QGGH01000012.1 Mesorhizobium loti strain DSM 2626 Ga0215673_112, whole genome shotgun sequence 164,152
NZ_QGGH01000013.1 Mesorhizobium loti strain DSM 2626 Ga0215673_113, whole genome shotgun sequence 149,673
NZ_QGGH01000014.1 Mesorhizobium loti strain DSM 2626 Ga0215673_114, whole genome shotgun sequence 146,171
NZ_QGGH01000015.1 Mesorhizobium loti strain DSM 2626 Ga0215673_115, whole genome shotgun sequence 124,112
NZ_QGGH01000016.1 Mesorhizobium loti strain DSM 2626 Ga0215673_116, whole genome shotgun sequence 109,365
NZ_QGGH01000017.1 Mesorhizobium loti strain DSM 2626 Ga0215673_117, whole genome shotgun sequence 108,415
NZ_QGGH01000018.1 Mesorhizobium loti strain DSM 2626 Ga0215673_118, whole genome shotgun sequence 107,788
NZ_QGGH01000019.1 Mesorhizobium loti strain DSM 2626 Ga0215673_119, whole genome shotgun sequence 87,800
NZ_QGGH01000020.1 Mesorhizobium loti strain DSM 2626 Ga0215673_120, whole genome shotgun sequence 83,500
NZ_QGGH01000021.1 Mesorhizobium loti strain DSM 2626 Ga0215673_121, whole genome shotgun sequence 77,507
NZ_QGGH01000022.1 Mesorhizobium loti strain DSM 2626 Ga0215673_122, whole genome shotgun sequence 76,748
NZ_QGGH01000023.1 Mesorhizobium loti strain DSM 2626 Ga0215673_123, whole genome shotgun sequence 69,203
NZ_QGGH01000024.1 Mesorhizobium loti strain DSM 2626 Ga0215673_124, whole genome shotgun sequence 54,933
NZ_QGGH01000025.1 Mesorhizobium loti strain DSM 2626 Ga0215673_125, whole genome shotgun sequence 36,904
NZ_QGGH01000026.1 Mesorhizobium loti strain DSM 2626 Ga0215673_126, whole genome shotgun sequence 25,737
NZ_QGGH01000027.1 Mesorhizobium loti strain DSM 2626 Ga0215673_127, whole genome shotgun sequence 23,662
NZ_QGGH01000028.1 Mesorhizobium loti strain DSM 2626 Ga0215673_128, whole genome shotgun sequence 21,462
NZ_QGGH01000029.1 Mesorhizobium loti strain DSM 2626 Ga0215673_129, whole genome shotgun sequence 21,143
NZ_QGGH01000030.1 Mesorhizobium loti strain DSM 2626 Ga0215673_130, whole genome shotgun sequence 18,111
NZ_QGGH01000031.1 Mesorhizobium loti strain DSM 2626 Ga0215673_131, whole genome shotgun sequence 16,088
NZ_QGGH01000032.1 Mesorhizobium loti strain DSM 2626 Ga0215673_132, whole genome shotgun sequence 13,546
NZ_QGGH01000033.1 Mesorhizobium loti strain DSM 2626 Ga0215673_133, whole genome shotgun sequence 11,958
NZ_QGGH01000034.1 Mesorhizobium loti strain DSM 2626 Ga0215673_134, whole genome shotgun sequence 11,488
NZ_QGGH01000035.1 Mesorhizobium loti strain DSM 2626 Ga0215673_135, whole genome shotgun sequence 9,479
NZ_QGGH01000036.1 Mesorhizobium loti strain DSM 2626 Ga0215673_136, whole genome shotgun sequence 8,741
NZ_QGGH01000037.1 Mesorhizobium loti strain DSM 2626 Ga0215673_137, whole genome shotgun sequence 8,504
NZ_QGGH01000038.1 Mesorhizobium loti strain DSM 2626 Ga0215673_138, whole genome shotgun sequence 7,211
NZ_QGGH01000039.1 Mesorhizobium loti strain DSM 2626 Ga0215673_139, whole genome shotgun sequence 4,621
NZ_QGGH01000040.1 Mesorhizobium loti strain DSM 2626 Ga0215673_140, whole genome shotgun sequence 4,476
NZ_QGGH01000041.1 Mesorhizobium loti strain DSM 2626 Ga0215673_141, whole genome shotgun sequence 3,376
NZ_QGGH01000042.1 Mesorhizobium loti strain DSM 2626 Ga0215673_142, whole genome shotgun sequence 2,812
NZ_QGGH01000043.1 Mesorhizobium loti strain DSM 2626 Ga0215673_143, whole genome shotgun sequence 2,772
NZ_QGGH01000044.1 Mesorhizobium loti strain DSM 2626 Ga0215673_144, whole genome shotgun sequence 2,722
NZ_QGGH01000045.1 Mesorhizobium loti strain DSM 2626 Ga0215673_145, whole genome shotgun sequence 2,625
NZ_QGGH01000046.1 Mesorhizobium loti strain DSM 2626 Ga0215673_146, whole genome shotgun sequence 2,542
NZ_QGGH01000047.1 Mesorhizobium loti strain DSM 2626 Ga0215673_147, whole genome shotgun sequence 2,146
NZ_QGGH01000048.1 Mesorhizobium loti strain DSM 2626 Ga0215673_148, whole genome shotgun sequence 1,661
NZ_QGGH01000049.1 Mesorhizobium loti strain DSM 2626 Ga0215673_149, whole genome shotgun sequence 1,277
NZ_QGGH01000050.1 Mesorhizobium loti strain DSM 2626 Ga0215673_150, whole genome shotgun sequence 1,220
NZ_QGGH01000051.1 Mesorhizobium loti strain DSM 2626 Ga0215673_151, whole genome shotgun sequence 1,034
NZ_QGGH01000052.1 Mesorhizobium loti strain DSM 2626 Ga0215673_152, whole genome shotgun sequence 1,026

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory