fast.genomicscompare 6,575 genera of bacteria & archaea

 

Roseicyclus mahoneyensis DSM 16097

Genome identifier: GCF_003148775.1

NCBI assembly name: ASM314877v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Roseicyclus, Roseicyclus mahoneyensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Roseicyclus, Roseicyclus mahoneyensis

Scaffolds: 32

Genes: 3,990 Protein-coding: 3,913 RNAs: 50 pseudogenes: 27

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QGGW01000001.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_101, whole genome shotgun sequence 1,017,227
NZ_QGGW01000002.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_102, whole genome shotgun sequence 442,407
NZ_QGGW01000003.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_103, whole genome shotgun sequence 414,522
NZ_QGGW01000004.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_104, whole genome shotgun sequence 392,070
NZ_QGGW01000005.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_105, whole genome shotgun sequence 275,384
NZ_QGGW01000006.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_106, whole genome shotgun sequence 261,910
NZ_QGGW01000007.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_107, whole genome shotgun sequence 217,247
NZ_QGGW01000008.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_108, whole genome shotgun sequence 196,266
NZ_QGGW01000009.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_109, whole genome shotgun sequence 161,971
NZ_QGGW01000010.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_110, whole genome shotgun sequence 132,762
NZ_QGGW01000011.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_111, whole genome shotgun sequence 83,581
NZ_QGGW01000012.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_112, whole genome shotgun sequence 77,377
NZ_QGGW01000013.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_113, whole genome shotgun sequence 76,660
NZ_QGGW01000014.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_114, whole genome shotgun sequence 63,755
NZ_QGGW01000015.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_115, whole genome shotgun sequence 51,001
NZ_QGGW01000016.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_116, whole genome shotgun sequence 37,164
NZ_QGGW01000017.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_117, whole genome shotgun sequence 30,156
NZ_QGGW01000018.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_118, whole genome shotgun sequence 19,728
NZ_QGGW01000019.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_119, whole genome shotgun sequence 17,903
NZ_QGGW01000020.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_120, whole genome shotgun sequence 16,798
NZ_QGGW01000021.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_121, whole genome shotgun sequence 9,838
NZ_QGGW01000022.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_122, whole genome shotgun sequence 7,137
NZ_QGGW01000023.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_123, whole genome shotgun sequence 6,617
NZ_QGGW01000024.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_124, whole genome shotgun sequence 5,798
NZ_QGGW01000025.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_125, whole genome shotgun sequence 3,502
NZ_QGGW01000026.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_126, whole genome shotgun sequence 2,541
NZ_QGGW01000027.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_127, whole genome shotgun sequence 2,110
NZ_QGGW01000028.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_128, whole genome shotgun sequence 1,638
NZ_QGGW01000029.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_129, whole genome shotgun sequence 1,422
NZ_QGGW01000030.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_130, whole genome shotgun sequence 1,395
NZ_QGGW01000031.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_131, whole genome shotgun sequence 1,225
NZ_QGGW01000032.1 Roseicyclus mahoneyensis strain DSM 16097 Ga0215646_132, whole genome shotgun sequence 1,172

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory