fast.genomicscompare 6,575 genera of bacteria & archaea

 

Spiribacter_A halobius E85

Genome identifier: GCF_003149435.1

NCBI assembly name: ASM314943v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Nitrococcales, Nitrococcaceae, Spiribacter_A, Spiribacter_A halobius

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Chromatiales, Ectothiorhodospiraceae, Spiribacter, Spiribacter halobius

Scaffolds: 90

Genes: 3,877 Protein-coding: 3,785 RNAs: 53 pseudogenes: 39

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QFFI01000001.1 Spiribacter sp. E85 Scaffold1, whole genome shotgun sequence 242,766
NZ_QFFI01000002.1 Spiribacter sp. E85 Scaffold2, whole genome shotgun sequence 223,376
NZ_QFFI01000003.1 Spiribacter sp. E85 Scaffold3, whole genome shotgun sequence 206,538
NZ_QFFI01000004.1 Spiribacter sp. E85 Scaffold4, whole genome shotgun sequence 206,307
NZ_QFFI01000005.1 Spiribacter sp. E85 Scaffold5, whole genome shotgun sequence 199,369
NZ_QFFI01000006.1 Spiribacter sp. E85 Scaffold6, whole genome shotgun sequence 190,651
NZ_QFFI01000007.1 Spiribacter sp. E85 Scaffold7, whole genome shotgun sequence 157,058
NZ_QFFI01000008.1 Spiribacter sp. E85 Scaffold8, whole genome shotgun sequence 148,490
NZ_QFFI01000009.1 Spiribacter sp. E85 Scaffold9, whole genome shotgun sequence 138,346
NZ_QFFI01000010.1 Spiribacter sp. E85 Scaffold10, whole genome shotgun sequence 136,091
NZ_QFFI01000011.1 Spiribacter sp. E85 Scaffold11, whole genome shotgun sequence 127,881
NZ_QFFI01000012.1 Spiribacter sp. E85 Scaffold12, whole genome shotgun sequence 118,172
NZ_QFFI01000013.1 Spiribacter sp. E85 Scaffold13, whole genome shotgun sequence 109,656
NZ_QFFI01000014.1 Spiribacter sp. E85 Scaffold14, whole genome shotgun sequence 106,282
NZ_QFFI01000015.1 Spiribacter sp. E85 Scaffold15, whole genome shotgun sequence 96,372
NZ_QFFI01000016.1 Spiribacter sp. E85 Scaffold16, whole genome shotgun sequence 93,317
NZ_QFFI01000017.1 Spiribacter sp. E85 Scaffold17, whole genome shotgun sequence 86,418
NZ_QFFI01000018.1 Spiribacter sp. E85 Scaffold18, whole genome shotgun sequence 84,096
NZ_QFFI01000019.1 Spiribacter sp. E85 Scaffold19, whole genome shotgun sequence 79,498
NZ_QFFI01000020.1 Spiribacter sp. E85 Scaffold20, whole genome shotgun sequence 78,127
NZ_QFFI01000021.1 Spiribacter sp. E85 Scaffold21, whole genome shotgun sequence 76,032
NZ_QFFI01000022.1 Spiribacter sp. E85 Scaffold22, whole genome shotgun sequence 75,480
NZ_QFFI01000023.1 Spiribacter sp. E85 Scaffold23, whole genome shotgun sequence 61,477
NZ_QFFI01000024.1 Spiribacter sp. E85 Scaffold24, whole genome shotgun sequence 60,771
NZ_QFFI01000025.1 Spiribacter sp. E85 Scaffold25, whole genome shotgun sequence 58,820
NZ_QFFI01000026.1 Spiribacter sp. E85 Scaffold26, whole genome shotgun sequence 58,389
NZ_QFFI01000027.1 Spiribacter sp. E85 Scaffold27, whole genome shotgun sequence 49,953
NZ_QFFI01000028.1 Spiribacter sp. E85 Scaffold28, whole genome shotgun sequence 48,928
NZ_QFFI01000029.1 Spiribacter sp. E85 Scaffold29, whole genome shotgun sequence 48,603
NZ_QFFI01000030.1 Spiribacter sp. E85 Scaffold30, whole genome shotgun sequence 46,519
NZ_QFFI01000031.1 Spiribacter sp. E85 Scaffold31, whole genome shotgun sequence 41,612
NZ_QFFI01000032.1 Spiribacter sp. E85 Scaffold32, whole genome shotgun sequence 39,329
NZ_QFFI01000033.1 Spiribacter sp. E85 Scaffold33, whole genome shotgun sequence 36,046
NZ_QFFI01000034.1 Spiribacter sp. E85 Scaffold34, whole genome shotgun sequence 34,844
NZ_QFFI01000035.1 Spiribacter sp. E85 Scaffold35, whole genome shotgun sequence 33,897
NZ_QFFI01000036.1 Spiribacter sp. E85 Scaffold36, whole genome shotgun sequence 33,684
NZ_QFFI01000037.1 Spiribacter sp. E85 Scaffold37, whole genome shotgun sequence 29,550
NZ_QFFI01000038.1 Spiribacter sp. E85 Scaffold38, whole genome shotgun sequence 28,348
NZ_QFFI01000039.1 Spiribacter sp. E85 Scaffold39, whole genome shotgun sequence 26,794
NZ_QFFI01000040.1 Spiribacter sp. E85 Scaffold40, whole genome shotgun sequence 26,391
NZ_QFFI01000041.1 Spiribacter sp. E85 Scaffold41, whole genome shotgun sequence 24,246
NZ_QFFI01000042.1 Spiribacter sp. E85 Scaffold42, whole genome shotgun sequence 22,743
NZ_QFFI01000043.1 Spiribacter sp. E85 Scaffold43, whole genome shotgun sequence 22,406
NZ_QFFI01000044.1 Spiribacter sp. E85 Scaffold44, whole genome shotgun sequence 21,255
NZ_QFFI01000045.1 Spiribacter sp. E85 Scaffold45, whole genome shotgun sequence 21,225
NZ_QFFI01000046.1 Spiribacter sp. E85 Scaffold46, whole genome shotgun sequence 20,731
NZ_QFFI01000047.1 Spiribacter sp. E85 Scaffold47, whole genome shotgun sequence 20,403
NZ_QFFI01000048.1 Spiribacter sp. E85 Scaffold48, whole genome shotgun sequence 19,770
NZ_QFFI01000049.1 Spiribacter sp. E85 Scaffold49, whole genome shotgun sequence 19,722
NZ_QFFI01000050.1 Spiribacter sp. E85 Scaffold50, whole genome shotgun sequence 19,348
NZ_QFFI01000051.1 Spiribacter sp. E85 Scaffold51, whole genome shotgun sequence 18,309
NZ_QFFI01000052.1 Spiribacter sp. E85 Scaffold52, whole genome shotgun sequence 17,175
NZ_QFFI01000053.1 Spiribacter sp. E85 Scaffold53, whole genome shotgun sequence 16,128
NZ_QFFI01000054.1 Spiribacter sp. E85 Scaffold54, whole genome shotgun sequence 15,302
NZ_QFFI01000055.1 Spiribacter sp. E85 Scaffold55, whole genome shotgun sequence 11,490
NZ_QFFI01000056.1 Spiribacter sp. E85 Scaffold56, whole genome shotgun sequence 10,748
NZ_QFFI01000057.1 Spiribacter sp. E85 Scaffold57, whole genome shotgun sequence 10,730
NZ_QFFI01000058.1 Spiribacter sp. E85 Scaffold58, whole genome shotgun sequence 8,272
NZ_QFFI01000059.1 Spiribacter sp. E85 Scaffold59, whole genome shotgun sequence 8,254
NZ_QFFI01000060.1 Spiribacter sp. E85 Scaffold60, whole genome shotgun sequence 7,574
NZ_QFFI01000061.1 Spiribacter sp. E85 Scaffold61, whole genome shotgun sequence 7,219
NZ_QFFI01000062.1 Spiribacter sp. E85 Scaffold62, whole genome shotgun sequence 6,532
NZ_QFFI01000063.1 Spiribacter sp. E85 Scaffold63, whole genome shotgun sequence 6,505
NZ_QFFI01000064.1 Spiribacter sp. E85 Scaffold64, whole genome shotgun sequence 5,719
NZ_QFFI01000065.1 Spiribacter sp. E85 Scaffold65, whole genome shotgun sequence 5,157
NZ_QFFI01000066.1 Spiribacter sp. E85 Scaffold66, whole genome shotgun sequence 4,037
NZ_QFFI01000067.1 Spiribacter sp. E85 Scaffold67, whole genome shotgun sequence 3,958
NZ_QFFI01000068.1 Spiribacter sp. E85 Scaffold68, whole genome shotgun sequence 3,267
NZ_QFFI01000069.1 Spiribacter sp. E85 Scaffold69, whole genome shotgun sequence 2,772
NZ_QFFI01000070.1 Spiribacter sp. E85 Scaffold70, whole genome shotgun sequence 2,628
NZ_QFFI01000071.1 Spiribacter sp. E85 Scaffold71, whole genome shotgun sequence 2,585
NZ_QFFI01000072.1 Spiribacter sp. E85 Scaffold72, whole genome shotgun sequence 2,282
NZ_QFFI01000073.1 Spiribacter sp. E85 Scaffold73, whole genome shotgun sequence 2,228
NZ_QFFI01000074.1 Spiribacter sp. E85 Scaffold74, whole genome shotgun sequence 2,112
NZ_QFFI01000075.1 Spiribacter sp. E85 Scaffold75, whole genome shotgun sequence 2,061
NZ_QFFI01000076.1 Spiribacter sp. E85 Scaffold76, whole genome shotgun sequence 1,944
NZ_QFFI01000077.1 Spiribacter sp. E85 Scaffold77, whole genome shotgun sequence 1,686
NZ_QFFI01000078.1 Spiribacter sp. E85 Scaffold78, whole genome shotgun sequence 1,498
NZ_QFFI01000079.1 Spiribacter sp. E85 Scaffold79, whole genome shotgun sequence 1,425
NZ_QFFI01000080.1 Spiribacter sp. E85 Scaffold80, whole genome shotgun sequence 1,401
NZ_QFFI01000081.1 Spiribacter sp. E85 Scaffold81, whole genome shotgun sequence 1,185
NZ_QFFI01000082.1 Spiribacter sp. E85 Scaffold82, whole genome shotgun sequence 1,112
NZ_QFFI01000083.1 Spiribacter sp. E85 Scaffold83, whole genome shotgun sequence 1,057
NZ_QFFI01000084.1 Spiribacter sp. E85 Scaffold84, whole genome shotgun sequence 1,024
NZ_QFFI01000085.1 Spiribacter sp. E85 Scaffold85, whole genome shotgun sequence 974
NZ_QFFI01000086.1 Spiribacter sp. E85 Scaffold86, whole genome shotgun sequence 851
NZ_QFFI01000087.1 Spiribacter sp. E85 Scaffold87, whole genome shotgun sequence 646
NZ_QFFI01000088.1 Spiribacter sp. E85 Scaffold88, whole genome shotgun sequence 618
NZ_QFFI01000089.1 Spiribacter sp. E85 Scaffold89, whole genome shotgun sequence 606
NZ_QFFI01000090.1 Spiribacter sp. E85 Scaffold90, whole genome shotgun sequence 584

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory