fast.genomicscompare 6,575 genera of bacteria & archaea

 

Plasticicumulans acidivorans DSM 23606

Genome identifier: GCF_003182095.1

NCBI assembly name: ASM318209v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Competibacterales, Competibacteraceae, Plasticicumulans, Plasticicumulans acidivorans

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Candidatus Competibacteraceae, Plasticicumulans, Plasticicumulans acidivorans

Scaffolds: 28

Genes: 3,994 Protein-coding: 3,874 RNAs: 62 pseudogenes: 58

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QGTJ01000001.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_101, whole genome shotgun sequence 619,877
NZ_QGTJ01000002.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_102, whole genome shotgun sequence 613,814
NZ_QGTJ01000003.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_103, whole genome shotgun sequence 526,106
NZ_QGTJ01000004.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_104, whole genome shotgun sequence 356,606
NZ_QGTJ01000005.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_105, whole genome shotgun sequence 339,697
NZ_QGTJ01000006.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_106, whole genome shotgun sequence 304,410
NZ_QGTJ01000007.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_107, whole genome shotgun sequence 276,454
NZ_QGTJ01000008.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_108, whole genome shotgun sequence 196,747
NZ_QGTJ01000009.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_109, whole genome shotgun sequence 183,060
NZ_QGTJ01000010.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_110, whole genome shotgun sequence 145,863
NZ_QGTJ01000011.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_111, whole genome shotgun sequence 145,166
NZ_QGTJ01000012.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_112, whole genome shotgun sequence 143,804
NZ_QGTJ01000013.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_113, whole genome shotgun sequence 121,216
NZ_QGTJ01000014.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_114, whole genome shotgun sequence 91,042
NZ_QGTJ01000015.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_115, whole genome shotgun sequence 50,771
NZ_QGTJ01000016.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_116, whole genome shotgun sequence 43,434
NZ_QGTJ01000017.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_117, whole genome shotgun sequence 31,221
NZ_QGTJ01000018.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_118, whole genome shotgun sequence 30,133
NZ_QGTJ01000019.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_119, whole genome shotgun sequence 21,866
NZ_QGTJ01000020.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_120, whole genome shotgun sequence 16,295
NZ_QGTJ01000021.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_121, whole genome shotgun sequence 12,732
NZ_QGTJ01000022.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_122, whole genome shotgun sequence 12,683
NZ_QGTJ01000023.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_123, whole genome shotgun sequence 5,433
NZ_QGTJ01000024.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_124, whole genome shotgun sequence 2,448
NZ_QGTJ01000025.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_125, whole genome shotgun sequence 1,634
NZ_QGTJ01000026.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_126, whole genome shotgun sequence 1,429
NZ_QGTJ01000027.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_127, whole genome shotgun sequence 1,209
NZ_QGTJ01000028.1 Plasticicumulans acidivorans strain DSM 23606 Ga0215699_128, whole genome shotgun sequence 1,115

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory