fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudoroseicyclus aestuarii CECT 9025

Genome identifier: GCF_003217255.1

NCBI assembly name: ASM321725v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Pseudoroseicyclus, Pseudoroseicyclus aestuarii

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Pseudoroseicyclus, Pseudoroseicyclus aestuarii

Scaffolds: 26

Genes: 3,368 Protein-coding: 3,276 RNAs: 53 pseudogenes: 39

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QJTE01000001.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_101, whole genome shotgun sequence 1,005,852
NZ_QJTE01000002.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_102, whole genome shotgun sequence 906,490
NZ_QJTE01000003.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_103, whole genome shotgun sequence 540,388
NZ_QJTE01000004.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_104, whole genome shotgun sequence 367,404
NZ_QJTE01000005.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_105, whole genome shotgun sequence 110,821
NZ_QJTE01000006.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_106, whole genome shotgun sequence 104,348
NZ_QJTE01000007.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_107, whole genome shotgun sequence 103,639
NZ_QJTE01000008.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_108, whole genome shotgun sequence 62,306
NZ_QJTE01000009.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_109, whole genome shotgun sequence 57,259
NZ_QJTE01000010.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_110, whole genome shotgun sequence 38,106
NZ_QJTE01000011.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_111, whole genome shotgun sequence 33,812
NZ_QJTE01000012.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_112, whole genome shotgun sequence 26,657
NZ_QJTE01000013.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_113, whole genome shotgun sequence 23,626
NZ_QJTE01000014.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_114, whole genome shotgun sequence 14,119
NZ_QJTE01000015.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_115, whole genome shotgun sequence 14,013
NZ_QJTE01000016.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_116, whole genome shotgun sequence 6,726
NZ_QJTE01000017.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_117, whole genome shotgun sequence 5,593
NZ_QJTE01000018.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_118, whole genome shotgun sequence 4,635
NZ_QJTE01000019.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_119, whole genome shotgun sequence 4,370
NZ_QJTE01000020.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_120, whole genome shotgun sequence 3,405
NZ_QJTE01000021.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_121, whole genome shotgun sequence 2,847
NZ_QJTE01000022.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_122, whole genome shotgun sequence 2,533
NZ_QJTE01000023.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_123, whole genome shotgun sequence 1,472
NZ_QJTE01000024.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_124, whole genome shotgun sequence 1,412
NZ_QJTE01000025.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_125, whole genome shotgun sequence 1,241
NZ_QJTE01000026.1 Pseudoroseicyclus aestuarii strain CECT 9025 Ga0244621_126, whole genome shotgun sequence 1,239

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory