fast.genomicscompare 6,575 genera of bacteria & archaea

 

Putridiphycobacter roseus SM1701

Genome identifier: GCF_003234935.1

NCBI assembly name: ASM323493v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Crocinitomicaceae, Putridiphycobacter, Putridiphycobacter roseus

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Crocinitomicaceae, Putridiphycobacter, Putridiphycobacter roseus

Scaffolds: 105

Genes: 3,518 Protein-coding: 3,465 RNAs: 46 pseudogenes: 7

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QKSB01000001.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold1, whole genome shotgun sequence 896,313
NZ_QKSB01000002.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold2, whole genome shotgun sequence 580,582
NZ_QKSB01000003.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold3, whole genome shotgun sequence 334,368
NZ_QKSB01000004.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold4, whole genome shotgun sequence 301,943
NZ_QKSB01000005.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold5, whole genome shotgun sequence 293,634
NZ_QKSB01000006.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold6, whole genome shotgun sequence 260,344
NZ_QKSB01000007.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold7, whole genome shotgun sequence 209,853
NZ_QKSB01000008.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold8, whole genome shotgun sequence 155,930
NZ_QKSB01000009.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold9, whole genome shotgun sequence 139,089
NZ_QKSB01000010.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold10, whole genome shotgun sequence 118,904
NZ_QKSB01000011.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold11, whole genome shotgun sequence 93,030
NZ_QKSB01000012.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold12, whole genome shotgun sequence 88,695
NZ_QKSB01000013.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold13, whole genome shotgun sequence 82,974
NZ_QKSB01000014.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold14, whole genome shotgun sequence 71,717
NZ_QKSB01000015.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold15, whole genome shotgun sequence 63,223
NZ_QKSB01000016.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold16, whole genome shotgun sequence 59,525
NZ_QKSB01000017.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold17, whole genome shotgun sequence 53,138
NZ_QKSB01000018.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold18, whole genome shotgun sequence 37,689
NZ_QKSB01000019.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold19, whole genome shotgun sequence 22,110
NZ_QKSB01000020.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold20, whole genome shotgun sequence 20,814
NZ_QKSB01000021.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold21, whole genome shotgun sequence 18,338
NZ_QKSB01000022.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold22, whole genome shotgun sequence 8,357
NZ_QKSB01000023.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold23, whole genome shotgun sequence 7,823
NZ_QKSB01000024.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold24, whole genome shotgun sequence 7,492
NZ_QKSB01000025.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold25, whole genome shotgun sequence 5,983
NZ_QKSB01000026.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold26, whole genome shotgun sequence 5,748
NZ_QKSB01000027.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold27, whole genome shotgun sequence 5,553
NZ_QKSB01000028.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold28, whole genome shotgun sequence 5,465
NZ_QKSB01000029.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold29, whole genome shotgun sequence 5,199
NZ_QKSB01000030.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold30, whole genome shotgun sequence 4,814
NZ_QKSB01000031.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold31, whole genome shotgun sequence 4,642
NZ_QKSB01000032.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold32, whole genome shotgun sequence 4,469
NZ_QKSB01000033.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold33, whole genome shotgun sequence 4,247
NZ_QKSB01000034.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold34, whole genome shotgun sequence 2,953
NZ_QKSB01000035.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold35, whole genome shotgun sequence 2,882
NZ_QKSB01000036.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold36, whole genome shotgun sequence 2,591
NZ_QKSB01000037.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold37, whole genome shotgun sequence 2,438
NZ_QKSB01000038.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold38, whole genome shotgun sequence 1,975
NZ_QKSB01000039.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold39, whole genome shotgun sequence 1,949
NZ_QKSB01000040.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold40, whole genome shotgun sequence 1,927
NZ_QKSB01000041.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold41, whole genome shotgun sequence 1,926
NZ_QKSB01000042.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold42, whole genome shotgun sequence 1,770
NZ_QKSB01000043.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold43, whole genome shotgun sequence 1,534
NZ_QKSB01000044.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold44, whole genome shotgun sequence 1,529
NZ_QKSB01000045.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold45, whole genome shotgun sequence 1,459
NZ_QKSB01000046.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold46, whole genome shotgun sequence 1,430
NZ_QKSB01000047.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold47, whole genome shotgun sequence 1,393
NZ_QKSB01000048.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold48, whole genome shotgun sequence 1,379
NZ_QKSB01000049.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold49, whole genome shotgun sequence 1,302
NZ_QKSB01000050.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold50, whole genome shotgun sequence 1,301
NZ_QKSB01000051.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold51, whole genome shotgun sequence 1,226
NZ_QKSB01000052.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold52, whole genome shotgun sequence 1,230
NZ_QKSB01000053.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold53, whole genome shotgun sequence 1,211
NZ_QKSB01000054.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold54, whole genome shotgun sequence 1,200
NZ_QKSB01000055.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold55, whole genome shotgun sequence 1,114
NZ_QKSB01000056.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold56, whole genome shotgun sequence 1,135
NZ_QKSB01000057.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold57, whole genome shotgun sequence 1,075
NZ_QKSB01000058.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold58, whole genome shotgun sequence 1,072
NZ_QKSB01000059.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold59, whole genome shotgun sequence 1,046
NZ_QKSB01000060.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold60, whole genome shotgun sequence 1,034
NZ_QKSB01000061.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold61, whole genome shotgun sequence 978
NZ_QKSB01000062.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold62, whole genome shotgun sequence 972
NZ_QKSB01000063.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold63, whole genome shotgun sequence 882
NZ_QKSB01000064.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold64, whole genome shotgun sequence 860
NZ_QKSB01000065.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold65, whole genome shotgun sequence 857
NZ_QKSB01000066.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold66, whole genome shotgun sequence 836
NZ_QKSB01000067.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold67, whole genome shotgun sequence 794
NZ_QKSB01000068.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold68, whole genome shotgun sequence 794
NZ_QKSB01000069.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold69, whole genome shotgun sequence 763
NZ_QKSB01000070.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold70, whole genome shotgun sequence 737
NZ_QKSB01000071.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold71, whole genome shotgun sequence 737
NZ_QKSB01000072.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold72, whole genome shotgun sequence 714
NZ_QKSB01000073.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold73, whole genome shotgun sequence 707
NZ_QKSB01000074.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold74, whole genome shotgun sequence 692
NZ_QKSB01000075.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold75, whole genome shotgun sequence 642
NZ_QKSB01000076.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold76, whole genome shotgun sequence 634
NZ_QKSB01000077.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold77, whole genome shotgun sequence 626
NZ_QKSB01000078.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold78, whole genome shotgun sequence 626
NZ_QKSB01000079.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold79, whole genome shotgun sequence 580
NZ_QKSB01000080.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold80, whole genome shotgun sequence 571
NZ_QKSB01000081.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold81, whole genome shotgun sequence 569
NZ_QKSB01000082.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold82, whole genome shotgun sequence 565
NZ_QKSB01000083.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold83, whole genome shotgun sequence 562
NZ_QKSB01000084.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold84, whole genome shotgun sequence 560
NZ_QKSB01000085.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold85, whole genome shotgun sequence 559
NZ_QKSB01000086.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold86, whole genome shotgun sequence 553
NZ_QKSB01000087.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold87, whole genome shotgun sequence 550
NZ_QKSB01000088.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold88, whole genome shotgun sequence 491
NZ_QKSB01000089.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold89, whole genome shotgun sequence 534
NZ_QKSB01000090.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold90, whole genome shotgun sequence 530
NZ_QKSB01000091.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold91, whole genome shotgun sequence 523
NZ_QKSB01000092.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold92, whole genome shotgun sequence 522
NZ_QKSB01000093.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold94, whole genome shotgun sequence 519
NZ_QKSB01000094.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold95, whole genome shotgun sequence 519
NZ_QKSB01000095.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold96, whole genome shotgun sequence 514
NZ_QKSB01000096.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold97, whole genome shotgun sequence 511
NZ_QKSB01000097.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold98, whole genome shotgun sequence 511
NZ_QKSB01000098.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold99, whole genome shotgun sequence 510
NZ_QKSB01000099.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold100, whole genome shotgun sequence 510
NZ_QKSB01000100.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold101, whole genome shotgun sequence 508
NZ_QKSB01000101.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold102, whole genome shotgun sequence 508
NZ_QKSB01000102.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold103, whole genome shotgun sequence 505
NZ_QKSB01000103.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold104, whole genome shotgun sequence 228
NZ_QKSB01000104.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold105, whole genome shotgun sequence 503
NZ_QKSB01000105.1 Putridiphycobacter roseus strain SM1701 SM1701_scaffold107, whole genome shotgun sequence 500

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory