fast.genomicscompare 6,575 genera of bacteria & archaea

 

Aestuariivirga litoralis KCTC 52945

Genome identifier: GCF_003234965.1

NCBI assembly name: ASM323496v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Aestuariivirgaceae, Aestuariivirga, Aestuariivirga litoralis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Aestuariivirgaceae, Aestuariivirga, Aestuariivirga litoralis

Scaffolds: 26

Genes: 4,089 Protein-coding: 3,998 RNAs: 52 pseudogenes: 39

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QKVK01000001.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig1, whole genome shotgun sequence 827,936
NZ_QKVK01000002.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig2, whole genome shotgun sequence 665,913
NZ_QKVK01000003.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig3, whole genome shotgun sequence 505,639
NZ_QKVK01000004.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig4, whole genome shotgun sequence 365,037
NZ_QKVK01000005.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig5, whole genome shotgun sequence 321,224
NZ_QKVK01000006.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig6, whole genome shotgun sequence 310,174
NZ_QKVK01000007.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig7, whole genome shotgun sequence 273,635
NZ_QKVK01000008.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig8, whole genome shotgun sequence 216,430
NZ_QKVK01000009.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig9, whole genome shotgun sequence 216,143
NZ_QKVK01000010.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig10, whole genome shotgun sequence 114,671
NZ_QKVK01000011.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig11, whole genome shotgun sequence 74,745
NZ_QKVK01000012.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig12, whole genome shotgun sequence 67,829
NZ_QKVK01000013.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig13, whole genome shotgun sequence 58,606
NZ_QKVK01000014.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig14, whole genome shotgun sequence 51,385
NZ_QKVK01000015.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig15, whole genome shotgun sequence 46,661
NZ_QKVK01000016.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig16, whole genome shotgun sequence 39,165
NZ_QKVK01000017.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig17, whole genome shotgun sequence 32,419
NZ_QKVK01000018.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig18, whole genome shotgun sequence 27,753
NZ_QKVK01000019.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig19, whole genome shotgun sequence 5,503
NZ_QKVK01000020.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig20, whole genome shotgun sequence 3,031
NZ_QKVK01000021.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig21, whole genome shotgun sequence 2,116
NZ_QKVK01000022.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig22, whole genome shotgun sequence 1,766
NZ_QKVK01000023.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig23, whole genome shotgun sequence 1,186
NZ_QKVK01000024.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig24, whole genome shotgun sequence 1,023
NZ_QKVK01000025.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig25, whole genome shotgun sequence 730
NZ_QKVK01000026.1 Aestuariivirga litoralis strain KCTC 52945 M10001_Contig26, whole genome shotgun sequence 555

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory