fast.genomicscompare 6,575 genera of bacteria & archaea

 

Paracraurococcus frigidaeris DB1506

Genome identifier: GCF_003258945.1

NCBI assembly name: ASM325894v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Acetobacterales, Acetobacteraceae, Paracraurococcus, Paracraurococcus frigidaeris

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Acetobacteraceae, Roseicella, Roseicella frigidaeris

Scaffolds: 87

Genes: 5,440 Protein-coding: 5,343 RNAs: 56 pseudogenes: 41

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QLIX01000001.1 Roseicella frigidaeris strain DB1506 4-DB1506_1, whole genome shotgun sequence 635,423
NZ_QLIX01000002.1 Roseicella frigidaeris strain DB1506 4-DB1506_2, whole genome shotgun sequence 566,742
NZ_QLIX01000003.1 Roseicella frigidaeris strain DB1506 4-DB1506_3, whole genome shotgun sequence 420,018
NZ_QLIX01000004.1 Roseicella frigidaeris strain DB1506 4-DB1506_4, whole genome shotgun sequence 348,069
NZ_QLIX01000005.1 Roseicella frigidaeris strain DB1506 4-DB1506_5, whole genome shotgun sequence 284,337
NZ_QLIX01000006.1 Roseicella frigidaeris strain DB1506 4-DB1506_6, whole genome shotgun sequence 262,748
NZ_QLIX01000007.1 Roseicella frigidaeris strain DB1506 4-DB1506_7, whole genome shotgun sequence 236,153
NZ_QLIX01000008.1 Roseicella frigidaeris strain DB1506 4-DB1506_8, whole genome shotgun sequence 187,085
NZ_QLIX01000009.1 Roseicella frigidaeris strain DB1506 4-DB1506_9, whole genome shotgun sequence 182,262
NZ_QLIX01000010.1 Roseicella frigidaeris strain DB1506 4-DB1506_10, whole genome shotgun sequence 167,879
NZ_QLIX01000011.1 Roseicella frigidaeris strain DB1506 4-DB1506_11, whole genome shotgun sequence 151,728
NZ_QLIX01000012.1 Roseicella frigidaeris strain DB1506 4-DB1506_12, whole genome shotgun sequence 142,597
NZ_QLIX01000013.1 Roseicella frigidaeris strain DB1506 4-DB1506_13, whole genome shotgun sequence 135,960
NZ_QLIX01000014.1 Roseicella frigidaeris strain DB1506 4-DB1506_14, whole genome shotgun sequence 133,293
NZ_QLIX01000015.1 Roseicella frigidaeris strain DB1506 4-DB1506_15, whole genome shotgun sequence 123,089
NZ_QLIX01000016.1 Roseicella frigidaeris strain DB1506 4-DB1506_16, whole genome shotgun sequence 116,938
NZ_QLIX01000017.1 Roseicella frigidaeris strain DB1506 4-DB1506_17, whole genome shotgun sequence 112,374
NZ_QLIX01000018.1 Roseicella frigidaeris strain DB1506 4-DB1506_18, whole genome shotgun sequence 102,333
NZ_QLIX01000019.1 Roseicella frigidaeris strain DB1506 4-DB1506_19, whole genome shotgun sequence 99,516
NZ_QLIX01000020.1 Roseicella frigidaeris strain DB1506 4-DB1506_20, whole genome shotgun sequence 95,598
NZ_QLIX01000021.1 Roseicella frigidaeris strain DB1506 4-DB1506_21, whole genome shotgun sequence 94,764
NZ_QLIX01000022.1 Roseicella frigidaeris strain DB1506 4-DB1506_22, whole genome shotgun sequence 84,683
NZ_QLIX01000023.1 Roseicella frigidaeris strain DB1506 4-DB1506_23, whole genome shotgun sequence 73,980
NZ_QLIX01000024.1 Roseicella frigidaeris strain DB1506 4-DB1506_24, whole genome shotgun sequence 73,407
NZ_QLIX01000025.1 Roseicella frigidaeris strain DB1506 4-DB1506_25, whole genome shotgun sequence 70,730
NZ_QLIX01000026.1 Roseicella frigidaeris strain DB1506 4-DB1506_26, whole genome shotgun sequence 63,575
NZ_QLIX01000027.1 Roseicella frigidaeris strain DB1506 4-DB1506_27, whole genome shotgun sequence 58,147
NZ_QLIX01000028.1 Roseicella frigidaeris strain DB1506 4-DB1506_28, whole genome shotgun sequence 53,489
NZ_QLIX01000029.1 Roseicella frigidaeris strain DB1506 4-DB1506_29, whole genome shotgun sequence 50,218
NZ_QLIX01000030.1 Roseicella frigidaeris strain DB1506 4-DB1506_30, whole genome shotgun sequence 45,742
NZ_QLIX01000031.1 Roseicella frigidaeris strain DB1506 4-DB1506_31, whole genome shotgun sequence 44,578
NZ_QLIX01000032.1 Roseicella frigidaeris strain DB1506 4-DB1506_32, whole genome shotgun sequence 42,525
NZ_QLIX01000033.1 Roseicella frigidaeris strain DB1506 4-DB1506_33, whole genome shotgun sequence 38,432
NZ_QLIX01000034.1 Roseicella frigidaeris strain DB1506 4-DB1506_34, whole genome shotgun sequence 38,207
NZ_QLIX01000035.1 Roseicella frigidaeris strain DB1506 4-DB1506_35, whole genome shotgun sequence 33,321
NZ_QLIX01000036.1 Roseicella frigidaeris strain DB1506 4-DB1506_36, whole genome shotgun sequence 29,694
NZ_QLIX01000037.1 Roseicella frigidaeris strain DB1506 4-DB1506_37, whole genome shotgun sequence 27,791
NZ_QLIX01000038.1 Roseicella frigidaeris strain DB1506 4-DB1506_38, whole genome shotgun sequence 25,402
NZ_QLIX01000039.1 Roseicella frigidaeris strain DB1506 4-DB1506_39, whole genome shotgun sequence 23,240
NZ_QLIX01000040.1 Roseicella frigidaeris strain DB1506 4-DB1506_40, whole genome shotgun sequence 23,108
NZ_QLIX01000041.1 Roseicella frigidaeris strain DB1506 4-DB1506_41, whole genome shotgun sequence 20,979
NZ_QLIX01000042.1 Roseicella frigidaeris strain DB1506 4-DB1506_42, whole genome shotgun sequence 20,009
NZ_QLIX01000043.1 Roseicella frigidaeris strain DB1506 4-DB1506_43, whole genome shotgun sequence 19,171
NZ_QLIX01000044.1 Roseicella frigidaeris strain DB1506 4-DB1506_44, whole genome shotgun sequence 17,890
NZ_QLIX01000045.1 Roseicella frigidaeris strain DB1506 4-DB1506_45, whole genome shotgun sequence 17,759
NZ_QLIX01000046.1 Roseicella frigidaeris strain DB1506 4-DB1506_46, whole genome shotgun sequence 15,906
NZ_QLIX01000047.1 Roseicella frigidaeris strain DB1506 4-DB1506_47, whole genome shotgun sequence 15,764
NZ_QLIX01000048.1 Roseicella frigidaeris strain DB1506 4-DB1506_48, whole genome shotgun sequence 12,672
NZ_QLIX01000049.1 Roseicella frigidaeris strain DB1506 4-DB1506_49, whole genome shotgun sequence 12,532
NZ_QLIX01000050.1 Roseicella frigidaeris strain DB1506 4-DB1506_50, whole genome shotgun sequence 12,315
NZ_QLIX01000051.1 Roseicella frigidaeris strain DB1506 4-DB1506_51, whole genome shotgun sequence 12,065
NZ_QLIX01000052.1 Roseicella frigidaeris strain DB1506 4-DB1506_52, whole genome shotgun sequence 10,172
NZ_QLIX01000053.1 Roseicella frigidaeris strain DB1506 4-DB1506_53, whole genome shotgun sequence 9,914
NZ_QLIX01000054.1 Roseicella frigidaeris strain DB1506 4-DB1506_54, whole genome shotgun sequence 9,657
NZ_QLIX01000055.1 Roseicella frigidaeris strain DB1506 4-DB1506_55, whole genome shotgun sequence 9,545
NZ_QLIX01000056.1 Roseicella frigidaeris strain DB1506 4-DB1506_56, whole genome shotgun sequence 8,297
NZ_QLIX01000057.1 Roseicella frigidaeris strain DB1506 4-DB1506_57, whole genome shotgun sequence 7,857
NZ_QLIX01000058.1 Roseicella frigidaeris strain DB1506 4-DB1506_58, whole genome shotgun sequence 6,727
NZ_QLIX01000059.1 Roseicella frigidaeris strain DB1506 4-DB1506_59, whole genome shotgun sequence 6,336
NZ_QLIX01000060.1 Roseicella frigidaeris strain DB1506 4-DB1506_60, whole genome shotgun sequence 6,176
NZ_QLIX01000061.1 Roseicella frigidaeris strain DB1506 4-DB1506_61, whole genome shotgun sequence 6,127
NZ_QLIX01000062.1 Roseicella frigidaeris strain DB1506 4-DB1506_62, whole genome shotgun sequence 5,631
NZ_QLIX01000063.1 Roseicella frigidaeris strain DB1506 4-DB1506_63, whole genome shotgun sequence 5,448
NZ_QLIX01000064.1 Roseicella frigidaeris strain DB1506 4-DB1506_64, whole genome shotgun sequence 5,094
NZ_QLIX01000065.1 Roseicella frigidaeris strain DB1506 4-DB1506_65, whole genome shotgun sequence 4,394
NZ_QLIX01000066.1 Roseicella frigidaeris strain DB1506 4-DB1506_66, whole genome shotgun sequence 3,850
NZ_QLIX01000067.1 Roseicella frigidaeris strain DB1506 4-DB1506_67, whole genome shotgun sequence 3,526
NZ_QLIX01000068.1 Roseicella frigidaeris strain DB1506 4-DB1506_68, whole genome shotgun sequence 3,416
NZ_QLIX01000069.1 Roseicella frigidaeris strain DB1506 4-DB1506_69, whole genome shotgun sequence 3,315
NZ_QLIX01000070.1 Roseicella frigidaeris strain DB1506 4-DB1506_70, whole genome shotgun sequence 3,206
NZ_QLIX01000071.1 Roseicella frigidaeris strain DB1506 4-DB1506_71, whole genome shotgun sequence 3,003
NZ_QLIX01000072.1 Roseicella frigidaeris strain DB1506 4-DB1506_72, whole genome shotgun sequence 2,306
NZ_QLIX01000073.1 Roseicella frigidaeris strain DB1506 4-DB1506_73, whole genome shotgun sequence 2,286
NZ_QLIX01000074.1 Roseicella frigidaeris strain DB1506 4-DB1506_74, whole genome shotgun sequence 2,221
NZ_QLIX01000075.1 Roseicella frigidaeris strain DB1506 4-DB1506_75, whole genome shotgun sequence 2,049
NZ_QLIX01000076.1 Roseicella frigidaeris strain DB1506 4-DB1506_76, whole genome shotgun sequence 1,929
NZ_QLIX01000077.1 Roseicella frigidaeris strain DB1506 4-DB1506_77, whole genome shotgun sequence 1,660
NZ_QLIX01000078.1 Roseicella frigidaeris strain DB1506 4-DB1506_78, whole genome shotgun sequence 1,570
NZ_QLIX01000079.1 Roseicella frigidaeris strain DB1506 4-DB1506_79, whole genome shotgun sequence 1,495
NZ_QLIX01000080.1 Roseicella frigidaeris strain DB1506 4-DB1506_80, whole genome shotgun sequence 1,461
NZ_QLIX01000081.1 Roseicella frigidaeris strain DB1506 4-DB1506_81, whole genome shotgun sequence 1,339
NZ_QLIX01000082.1 Roseicella frigidaeris strain DB1506 4-DB1506_82, whole genome shotgun sequence 1,214
NZ_QLIX01000083.1 Roseicella frigidaeris strain DB1506 4-DB1506_83, whole genome shotgun sequence 1,194
NZ_QLIX01000084.1 Roseicella frigidaeris strain DB1506 4-DB1506_84, whole genome shotgun sequence 1,193
NZ_QLIX01000085.1 Roseicella frigidaeris strain DB1506 4-DB1506_85, whole genome shotgun sequence 1,111
NZ_QLIX01000086.1 Roseicella frigidaeris strain DB1506 4-DB1506_86, whole genome shotgun sequence 1,081
NZ_QLIX01000087.1 Roseicella frigidaeris strain DB1506 4-DB1506_87, whole genome shotgun sequence 1,042

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory