fast.genomicscompare 6,575 genera of bacteria & archaea

 

Lujinxingia litoralis B210

Genome identifier: GCF_003260125.1

NCBI assembly name: ASM326012v1

GTDB taxonomy: Bacteria, Myxococcota, Bradymonadia, Bradymonadales, Bradymonadaceae, Lujinxingia, Lujinxingia litoralis

NCBI taxonomy: Bacteria, Deltaproteobacteria, Bradymonadales, Lujinxingiaceae, Lujinxingia, Lujinxingia litoralis

Scaffolds: 30

Genes: 3,889 Protein-coding: 3,813 RNAs: 64 pseudogenes: 12

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QHKO01000001.1 Lujinxingia litoralis strain B210 B210_contig1, whole genome shotgun sequence 1,149,548
NZ_QHKO01000002.1 Lujinxingia litoralis strain B210 B210_contig2, whole genome shotgun sequence 734,088
NZ_QHKO01000003.1 Lujinxingia litoralis strain B210 B210_contig3, whole genome shotgun sequence 553,614
NZ_QHKO01000004.1 Lujinxingia litoralis strain B210 B210_contig4, whole genome shotgun sequence 491,720
NZ_QHKO01000005.1 Lujinxingia litoralis strain B210 B210_contig5, whole genome shotgun sequence 455,924
NZ_QHKO01000006.1 Lujinxingia litoralis strain B210 B210_contig6, whole genome shotgun sequence 245,630
NZ_QHKO01000007.1 Lujinxingia litoralis strain B210 B210_contig7, whole genome shotgun sequence 239,832
NZ_QHKO01000008.1 Lujinxingia litoralis strain B210 B210_contig8, whole genome shotgun sequence 189,856
NZ_QHKO01000009.1 Lujinxingia litoralis strain B210 B210_contig9, whole genome shotgun sequence 170,895
NZ_QHKO01000010.1 Lujinxingia litoralis strain B210 B210_contig10, whole genome shotgun sequence 169,435
NZ_QHKO01000011.1 Lujinxingia litoralis strain B210 B210_contig11, whole genome shotgun sequence 151,567
NZ_QHKO01000012.1 Lujinxingia litoralis strain B210 B210_contig12, whole genome shotgun sequence 132,366
NZ_QHKO01000013.1 Lujinxingia litoralis strain B210 B210_contig13, whole genome shotgun sequence 71,927
NZ_QHKO01000014.1 Lujinxingia litoralis strain B210 B210_contig14, whole genome shotgun sequence 55,660
NZ_QHKO01000015.1 Lujinxingia litoralis strain B210 B210_contig15, whole genome shotgun sequence 45,892
NZ_QHKO01000016.1 Lujinxingia litoralis strain B210 B210_contig16, whole genome shotgun sequence 42,085
NZ_QHKO01000017.1 Lujinxingia litoralis strain B210 B210_contig17, whole genome shotgun sequence 35,404
NZ_QHKO01000018.1 Lujinxingia litoralis strain B210 B210_contig18, whole genome shotgun sequence 32,353
NZ_QHKO01000019.1 Lujinxingia litoralis strain B210 B210_contig19, whole genome shotgun sequence 10,505
NZ_QHKO01000020.1 Lujinxingia litoralis strain B210 B210_contig20, whole genome shotgun sequence 5,329
NZ_QHKO01000021.1 Lujinxingia litoralis strain B210 B210_contig21, whole genome shotgun sequence 4,124
NZ_QHKO01000022.1 Lujinxingia litoralis strain B210 B210_contig22, whole genome shotgun sequence 4,078
NZ_QHKO01000023.1 Lujinxingia litoralis strain B210 B210_contig23, whole genome shotgun sequence 3,878
NZ_QHKO01000024.1 Lujinxingia litoralis strain B210 B210_contig24, whole genome shotgun sequence 3,428
NZ_QHKO01000025.1 Lujinxingia litoralis strain B210 B210_contig25, whole genome shotgun sequence 2,660
NZ_QHKO01000026.1 Lujinxingia litoralis strain B210 B210_contig26, whole genome shotgun sequence 2,625
NZ_QHKO01000027.1 Lujinxingia litoralis strain B210 B210_contig27, whole genome shotgun sequence 1,210
NZ_QHKO01000028.1 Lujinxingia litoralis strain B210 B210_contig28, whole genome shotgun sequence 1,146
NZ_QHKO01000029.1 Lujinxingia litoralis strain B210 B210_contig29, whole genome shotgun sequence 896
NZ_QHKO01000030.1 Lujinxingia litoralis strain B210 B210_contig30, whole genome shotgun sequence 709

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory