fast.genomicscompare 6,575 genera of bacteria & archaea

 

Hydrogeniiclostridium mannosilyticum ASD2818

Genome identifier: GCF_003268275.1

NCBI assembly name: ASM326827v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Acutalibacteraceae, Hydrogeniiclostridium, Hydrogeniiclostridium mannosilyticum

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Hydrogeniiclostridium, Hydrogeniiclostridium mannosilyticum

Scaffolds: 64

Genes: 2,839 Protein-coding: 2,715 RNAs: 68 pseudogenes: 56

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QLYR01000001.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_1_length_1010541_cov_84.453586, whole genome shotgun sequence 1,010,541
NZ_QLYR01000002.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_2_length_341363_cov_80.918708, whole genome shotgun sequence 341,363
NZ_QLYR01000003.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_3_length_237780_cov_81.079523, whole genome shotgun sequence 237,780
NZ_QLYR01000004.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_4_length_202602_cov_76.436827, whole genome shotgun sequence 202,602
NZ_QLYR01000005.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_5_length_199126_cov_87.201194, whole genome shotgun sequence 199,126
NZ_QLYR01000006.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_6_length_135644_cov_74.489405, whole genome shotgun sequence 135,644
NZ_QLYR01000007.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_7_length_127903_cov_70.316028, whole genome shotgun sequence 127,903
NZ_QLYR01000008.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_8_length_120956_cov_90.160993, whole genome shotgun sequence 120,956
NZ_QLYR01000009.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_9_length_103290_cov_78.545159, whole genome shotgun sequence 103,290
NZ_QLYR01000010.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_10_length_102791_cov_82.409018, whole genome shotgun sequence 102,791
NZ_QLYR01000011.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_11_length_97248_cov_77.753017, whole genome shotgun sequence 97,248
NZ_QLYR01000012.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_12_length_86017_cov_79.861498, whole genome shotgun sequence 86,017
NZ_QLYR01000013.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_13_length_47366_cov_69.890707, whole genome shotgun sequence 47,366
NZ_QLYR01000014.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_14_length_40879_cov_85.867847, whole genome shotgun sequence 40,879
NZ_QLYR01000015.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_15_length_33621_cov_89.442998, whole genome shotgun sequence 33,621
NZ_QLYR01000016.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_16_length_25403_cov_96.177512, whole genome shotgun sequence 25,403
NZ_QLYR01000017.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_17_length_21656_cov_74.507294, whole genome shotgun sequence 21,656
NZ_QLYR01000018.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_18_length_20823_cov_115.892795, whole genome shotgun sequence 20,823
NZ_QLYR01000019.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_19_length_16545_cov_123.173315, whole genome shotgun sequence 16,545
NZ_QLYR01000020.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_20_length_4983_cov_106.292015, whole genome shotgun sequence 4,983
NZ_QLYR01000021.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_21_length_3506_cov_374.265497, whole genome shotgun sequence 3,506
NZ_QLYR01000022.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_22_length_3409_cov_108.921184, whole genome shotgun sequence 3,409
NZ_QLYR01000023.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_23_length_2074_cov_117.684267, whole genome shotgun sequence 2,074
NZ_QLYR01000024.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_24_length_2046_cov_101.435842, whole genome shotgun sequence 2,046
NZ_QLYR01000025.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_25_length_1974_cov_72.656338, whole genome shotgun sequence 1,974
NZ_QLYR01000026.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_26_length_1698_cov_204.241494, whole genome shotgun sequence 1,698
NZ_QLYR01000027.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_27_length_1429_cov_104.800813, whole genome shotgun sequence 1,429
NZ_QLYR01000028.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_28_length_1313_cov_190.818671, whole genome shotgun sequence 1,313
NZ_QLYR01000029.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_29_length_1287_cov_344.702206, whole genome shotgun sequence 1,287
NZ_QLYR01000030.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_30_length_1232_cov_155.511133, whole genome shotgun sequence 1,232
NZ_QLYR01000031.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_31_length_1040_cov_113.822830, whole genome shotgun sequence 1,040
NZ_QLYR01000032.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_32_length_1037_cov_159.509547, whole genome shotgun sequence 1,037
NZ_QLYR01000033.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_33_length_960_cov_124.607096, whole genome shotgun sequence 960
NZ_QLYR01000034.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_34_length_960_cov_85.894875, whole genome shotgun sequence 960
NZ_QLYR01000035.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_35_length_884_cov_133.527007, whole genome shotgun sequence 884
NZ_QLYR01000036.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_36_length_791_cov_108.320946, whole genome shotgun sequence 791
NZ_QLYR01000037.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_37_length_707_cov_281.809055, whole genome shotgun sequence 707
NZ_QLYR01000038.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_38_length_700_cov_287.842315, whole genome shotgun sequence 700
NZ_QLYR01000039.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_39_length_649_cov_375.884444, whole genome shotgun sequence 649
NZ_QLYR01000040.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_40_length_610_cov_106.912409, whole genome shotgun sequence 610
NZ_QLYR01000041.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_41_length_560_cov_156.811634, whole genome shotgun sequence 560
NZ_QLYR01000042.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_42_length_492_cov_92.450512, whole genome shotgun sequence 492
NZ_QLYR01000043.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_43_length_492_cov_91.638225, whole genome shotgun sequence 492
NZ_QLYR01000044.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_44_length_442_cov_231.942387, whole genome shotgun sequence 442
NZ_QLYR01000045.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_45_length_420_cov_141.117647, whole genome shotgun sequence 420
NZ_QLYR01000046.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_46_length_417_cov_75.087156, whole genome shotgun sequence 417
NZ_QLYR01000047.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_47_length_399_cov_223.750000, whole genome shotgun sequence 399
NZ_QLYR01000048.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_48_length_399_cov_176.750000, whole genome shotgun sequence 399
NZ_QLYR01000049.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_49_length_399_cov_139.595000, whole genome shotgun sequence 399
NZ_QLYR01000050.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_50_length_399_cov_107.690000, whole genome shotgun sequence 399
NZ_QLYR01000051.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_51_length_399_cov_71.580000, whole genome shotgun sequence 399
NZ_QLYR01000052.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_52_length_399_cov_64.070000, whole genome shotgun sequence 399
NZ_QLYR01000053.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_53_length_392_cov_47.093264, whole genome shotgun sequence 392
NZ_QLYR01000054.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_54_length_381_cov_205.857143, whole genome shotgun sequence 381
NZ_QLYR01000055.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_55_length_376_cov_550.581921, whole genome shotgun sequence 376
NZ_QLYR01000056.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_56_length_363_cov_49.707317, whole genome shotgun sequence 363
NZ_QLYR01000057.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_57_length_352_cov_125.418301, whole genome shotgun sequence 352
NZ_QLYR01000058.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_58_length_347_cov_249.500000, whole genome shotgun sequence 347
NZ_QLYR01000059.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_59_length_345_cov_51.082192, whole genome shotgun sequence 345
NZ_QLYR01000060.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_60_length_304_cov_216.485714, whole genome shotgun sequence 304
NZ_QLYR01000061.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_61_length_294_cov_87.800000, whole genome shotgun sequence 294
NZ_QLYR01000062.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_62_length_292_cov_141.451613, whole genome shotgun sequence 292
NZ_QLYR01000063.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_63_length_264_cov_332.400000, whole genome shotgun sequence 264
NZ_QLYR01000064.1 Hydrogeniiclostridium mannosilyticum strain ASD2818 NODE_64_length_246_cov_367.787234, whole genome shotgun sequence 246

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory