fast.genomicscompare 6,575 genera of bacteria & archaea

 

NHYN01 sp003288845 15-1451

Genome identifier: GCF_003288845.1

NCBI assembly name: ASM328884v1

GTDB taxonomy: Bacteria, Campylobacterota, Campylobacteria, Campylobacterales, Helicobacteraceae, NHYN01, NHYN01 sp003288845

NCBI taxonomy: Bacteria, Campylobacterota, Epsilonproteobacteria, Campylobacterales, Helicobacteraceae, Helicobacter

Scaffolds: 131

Genes: 2,034 Protein-coding: 1,938 RNAs: 43 pseudogenes: 53

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_NHYN01000001.1 Helicobacter sp. 15-1451 NODE_1_length_200856_cov_44.0666, whole genome shotgun sequence 200,856
NZ_NHYN01000002.1 Helicobacter sp. 15-1451 NODE_2_length_172083_cov_53.5234, whole genome shotgun sequence 172,083
NZ_NHYN01000003.1 Helicobacter sp. 15-1451 NODE_3_length_148701_cov_65.0882, whole genome shotgun sequence 148,701
NZ_NHYN01000004.1 Helicobacter sp. 15-1451 NODE_4_length_142842_cov_49.8293, whole genome shotgun sequence 142,842
NZ_NHYN01000005.1 Helicobacter sp. 15-1451 NODE_5_length_140456_cov_41.6727, whole genome shotgun sequence 140,456
NZ_NHYN01000006.1 Helicobacter sp. 15-1451 NODE_6_length_75042_cov_66.3385, whole genome shotgun sequence 75,042
NZ_NHYN01000007.1 Helicobacter sp. 15-1451 NODE_7_length_73269_cov_44.1314, whole genome shotgun sequence 73,269
NZ_NHYN01000008.1 Helicobacter sp. 15-1451 NODE_8_length_67237_cov_48.7121, whole genome shotgun sequence 67,237
NZ_NHYN01000009.1 Helicobacter sp. 15-1451 NODE_9_length_64087_cov_47.2225, whole genome shotgun sequence 64,087
NZ_NHYN01000010.1 Helicobacter sp. 15-1451 NODE_10_length_61403_cov_53.871, whole genome shotgun sequence 61,403
NZ_NHYN01000011.1 Helicobacter sp. 15-1451 NODE_11_length_60723_cov_56.7823, whole genome shotgun sequence 60,723
NZ_NHYN01000012.1 Helicobacter sp. 15-1451 NODE_12_length_59214_cov_68.6705, whole genome shotgun sequence 59,214
NZ_NHYN01000013.1 Helicobacter sp. 15-1451 NODE_13_length_57622_cov_40.3398, whole genome shotgun sequence 57,622
NZ_NHYN01000014.1 Helicobacter sp. 15-1451 NODE_14_length_43407_cov_62.2098, whole genome shotgun sequence 43,407
NZ_NHYN01000015.1 Helicobacter sp. 15-1451 NODE_15_length_42957_cov_61.2778, whole genome shotgun sequence 42,957
NZ_NHYN01000016.1 Helicobacter sp. 15-1451 NODE_16_length_42245_cov_40.8346, whole genome shotgun sequence 42,245
NZ_NHYN01000017.1 Helicobacter sp. 15-1451 NODE_17_length_40782_cov_40.8465, whole genome shotgun sequence 40,782
NZ_NHYN01000018.1 Helicobacter sp. 15-1451 NODE_18_length_40188_cov_40.3931, whole genome shotgun sequence 40,188
NZ_NHYN01000019.1 Helicobacter sp. 15-1451 NODE_19_length_39483_cov_42.5403, whole genome shotgun sequence 39,483
NZ_NHYN01000020.1 Helicobacter sp. 15-1451 NODE_20_length_38931_cov_60.4354, whole genome shotgun sequence 38,931
NZ_NHYN01000021.1 Helicobacter sp. 15-1451 NODE_21_length_31820_cov_68.0914, whole genome shotgun sequence 31,820
NZ_NHYN01000022.1 Helicobacter sp. 15-1451 NODE_22_length_30079_cov_46.0404, whole genome shotgun sequence 30,079
NZ_NHYN01000023.1 Helicobacter sp. 15-1451 NODE_23_length_29009_cov_61.1676, whole genome shotgun sequence 29,009
NZ_NHYN01000024.1 Helicobacter sp. 15-1451 NODE_24_length_26528_cov_39.7942, whole genome shotgun sequence 26,528
NZ_NHYN01000025.1 Helicobacter sp. 15-1451 NODE_25_length_23897_cov_61.2259, whole genome shotgun sequence 23,897
NZ_NHYN01000026.1 Helicobacter sp. 15-1451 NODE_26_length_20174_cov_56.9262, whole genome shotgun sequence 20,174
NZ_NHYN01000027.1 Helicobacter sp. 15-1451 NODE_27_length_13858_cov_61.3881, whole genome shotgun sequence 13,858
NZ_NHYN01000028.1 Helicobacter sp. 15-1451 NODE_28_length_13384_cov_58.1609, whole genome shotgun sequence 13,384
NZ_NHYN01000029.1 Helicobacter sp. 15-1451 NODE_29_length_9397_cov_335.642, whole genome shotgun sequence 9,397
NZ_NHYN01000030.1 Helicobacter sp. 15-1451 NODE_30_length_8970_cov_68.4349, whole genome shotgun sequence 8,970
NZ_NHYN01000031.1 Helicobacter sp. 15-1451 NODE_31_length_8714_cov_162.457, whole genome shotgun sequence 8,714
NZ_NHYN01000032.1 Helicobacter sp. 15-1451 NODE_32_length_8470_cov_154.41, whole genome shotgun sequence 8,470
NZ_NHYN01000033.1 Helicobacter sp. 15-1451 NODE_33_length_8375_cov_50.1608, whole genome shotgun sequence 8,375
NZ_NHYN01000034.1 Helicobacter sp. 15-1451 NODE_34_length_7723_cov_55.4645, whole genome shotgun sequence 7,723
NZ_NHYN01000035.1 Helicobacter sp. 15-1451 NODE_35_length_6847_cov_168.08, whole genome shotgun sequence 6,847
NZ_NHYN01000036.1 Helicobacter sp. 15-1451 NODE_36_length_6227_cov_341.016, whole genome shotgun sequence 6,227
NZ_NHYN01000037.1 Helicobacter sp. 15-1451 NODE_37_length_5484_cov_106.399, whole genome shotgun sequence 5,484
NZ_NHYN01000038.1 Helicobacter sp. 15-1451 NODE_38_length_5305_cov_72.5455, whole genome shotgun sequence 5,305
NZ_NHYN01000039.1 Helicobacter sp. 15-1451 NODE_39_length_5293_cov_340.731, whole genome shotgun sequence 5,293
NZ_NHYN01000040.1 Helicobacter sp. 15-1451 NODE_40_length_5108_cov_64.547, whole genome shotgun sequence 5,108
NZ_NHYN01000041.1 Helicobacter sp. 15-1451 NODE_41_length_4938_cov_66.1653, whole genome shotgun sequence 4,938
NZ_NHYN01000042.1 Helicobacter sp. 15-1451 NODE_42_length_4569_cov_103.336, whole genome shotgun sequence 4,569
NZ_NHYN01000043.1 Helicobacter sp. 15-1451 NODE_43_length_4205_cov_40.464, whole genome shotgun sequence 4,205
NZ_NHYN01000044.1 Helicobacter sp. 15-1451 NODE_44_length_3879_cov_71.2669, whole genome shotgun sequence 3,879
NZ_NHYN01000045.1 Helicobacter sp. 15-1451 NODE_45_length_3835_cov_111.158, whole genome shotgun sequence 3,835
NZ_NHYN01000046.1 Helicobacter sp. 15-1451 NODE_46_length_3802_cov_47.441, whole genome shotgun sequence 3,802
NZ_NHYN01000047.1 Helicobacter sp. 15-1451 NODE_47_length_3782_cov_46.934, whole genome shotgun sequence 3,782
NZ_NHYN01000048.1 Helicobacter sp. 15-1451 NODE_48_length_3737_cov_2269.88, whole genome shotgun sequence 3,737
NZ_NHYN01000049.1 Helicobacter sp. 15-1451 NODE_49_length_3348_cov_131.175, whole genome shotgun sequence 3,348
NZ_NHYN01000050.1 Helicobacter sp. 15-1451 NODE_50_length_2867_cov_59.4866, whole genome shotgun sequence 2,867
NZ_NHYN01000051.1 Helicobacter sp. 15-1451 NODE_51_length_2644_cov_27.644, whole genome shotgun sequence 2,644
NZ_NHYN01000052.1 Helicobacter sp. 15-1451 NODE_52_length_2512_cov_69.5172, whole genome shotgun sequence 2,512
NZ_NHYN01000053.1 Helicobacter sp. 15-1451 NODE_53_length_2248_cov_173.118, whole genome shotgun sequence 2,248
NZ_NHYN01000054.1 Helicobacter sp. 15-1451 NODE_54_length_2093_cov_159.278, whole genome shotgun sequence 2,093
NZ_NHYN01000055.1 Helicobacter sp. 15-1451 NODE_55_length_1942_cov_381.752, whole genome shotgun sequence 1,942
NZ_NHYN01000056.1 Helicobacter sp. 15-1451 NODE_56_length_1878_cov_87.6054, whole genome shotgun sequence 1,878
NZ_NHYN01000057.1 Helicobacter sp. 15-1451 NODE_57_length_1672_cov_63.6198, whole genome shotgun sequence 1,672
NZ_NHYN01000058.1 Helicobacter sp. 15-1451 NODE_58_length_1563_cov_170.611, whole genome shotgun sequence 1,563
NZ_NHYN01000059.1 Helicobacter sp. 15-1451 NODE_59_length_1444_cov_64.4632, whole genome shotgun sequence 1,444
NZ_NHYN01000060.1 Helicobacter sp. 15-1451 NODE_60_length_1195_cov_49.5785, whole genome shotgun sequence 1,195
NZ_NHYN01000061.1 Helicobacter sp. 15-1451 NODE_61_length_1193_cov_366.608, whole genome shotgun sequence 1,193
NZ_NHYN01000062.1 Helicobacter sp. 15-1451 NODE_62_length_1184_cov_146.888, whole genome shotgun sequence 1,184
NZ_NHYN01000063.1 Helicobacter sp. 15-1451 NODE_63_length_1179_cov_106.738, whole genome shotgun sequence 1,179
NZ_NHYN01000064.1 Helicobacter sp. 15-1451 NODE_64_length_1166_cov_306.257, whole genome shotgun sequence 1,166
NZ_NHYN01000065.1 Helicobacter sp. 15-1451 NODE_65_length_1090_cov_57.4581, whole genome shotgun sequence 1,090
NZ_NHYN01000066.1 Helicobacter sp. 15-1451 NODE_66_length_1058_cov_175.365, whole genome shotgun sequence 1,058
NZ_NHYN01000067.1 Helicobacter sp. 15-1451 NODE_67_length_1043_cov_45.9544, whole genome shotgun sequence 1,043
NZ_NHYN01000068.1 Helicobacter sp. 15-1451 NODE_68_length_1028_cov_71.5565, whole genome shotgun sequence 1,028
NZ_NHYN01000069.1 Helicobacter sp. 15-1451 NODE_69_length_989_cov_603.488, whole genome shotgun sequence 989
NZ_NHYN01000070.1 Helicobacter sp. 15-1451 NODE_70_length_925_cov_102.764, whole genome shotgun sequence 925
NZ_NHYN01000071.1 Helicobacter sp. 15-1451 NODE_71_length_883_cov_100.837, whole genome shotgun sequence 883
NZ_NHYN01000072.1 Helicobacter sp. 15-1451 NODE_72_length_872_cov_153.856, whole genome shotgun sequence 872
NZ_NHYN01000073.1 Helicobacter sp. 15-1451 NODE_73_length_812_cov_50.1262, whole genome shotgun sequence 812
NZ_NHYN01000074.1 Helicobacter sp. 15-1451 NODE_74_length_795_cov_48.1537, whole genome shotgun sequence 795
NZ_NHYN01000075.1 Helicobacter sp. 15-1451 NODE_75_length_790_cov_98.6237, whole genome shotgun sequence 790
NZ_NHYN01000076.1 Helicobacter sp. 15-1451 NODE_76_length_768_cov_61.5067, whole genome shotgun sequence 768
NZ_NHYN01000077.1 Helicobacter sp. 15-1451 NODE_77_length_754_cov_328.189, whole genome shotgun sequence 754
NZ_NHYN01000078.1 Helicobacter sp. 15-1451 NODE_78_length_710_cov_46.5385, whole genome shotgun sequence 710
NZ_NHYN01000079.1 Helicobacter sp. 15-1451 NODE_79_length_695_cov_72.2349, whole genome shotgun sequence 695
NZ_NHYN01000080.1 Helicobacter sp. 15-1451 NODE_80_length_657_cov_214.149, whole genome shotgun sequence 657
NZ_NHYN01000081.1 Helicobacter sp. 15-1451 NODE_81_length_652_cov_76.8662, whole genome shotgun sequence 652
NZ_NHYN01000082.1 Helicobacter sp. 15-1451 NODE_82_length_647_cov_157.715, whole genome shotgun sequence 647
NZ_NHYN01000083.1 Helicobacter sp. 15-1451 NODE_83_length_618_cov_227.027, whole genome shotgun sequence 618
NZ_NHYN01000084.1 Helicobacter sp. 15-1451 NODE_84_length_601_cov_75.7709, whole genome shotgun sequence 601
NZ_NHYN01000085.1 Helicobacter sp. 15-1451 NODE_85_length_593_cov_247.709, whole genome shotgun sequence 593
NZ_NHYN01000086.1 Helicobacter sp. 15-1451 NODE_86_length_592_cov_64.6349, whole genome shotgun sequence 592
NZ_NHYN01000087.1 Helicobacter sp. 15-1451 NODE_87_length_588_cov_175.597, whole genome shotgun sequence 588
NZ_NHYN01000088.1 Helicobacter sp. 15-1451 NODE_88_length_580_cov_163.931, whole genome shotgun sequence 580
NZ_NHYN01000089.1 Helicobacter sp. 15-1451 NODE_89_length_571_cov_260.324, whole genome shotgun sequence 571
NZ_NHYN01000090.1 Helicobacter sp. 15-1451 NODE_90_length_571_cov_160.956, whole genome shotgun sequence 571
NZ_NHYN01000091.1 Helicobacter sp. 15-1451 NODE_91_length_571_cov_46.928, whole genome shotgun sequence 571
NZ_NHYN01000092.1 Helicobacter sp. 15-1451 NODE_92_length_567_cov_115.425, whole genome shotgun sequence 567
NZ_NHYN01000093.1 Helicobacter sp. 15-1451 NODE_93_length_521_cov_114.865, whole genome shotgun sequence 521
NZ_NHYN01000094.1 Helicobacter sp. 15-1451 NODE_94_length_513_cov_431.874, whole genome shotgun sequence 513
NZ_NHYN01000095.1 Helicobacter sp. 15-1451 NODE_95_length_513_cov_146.749, whole genome shotgun sequence 513
NZ_NHYN01000096.1 Helicobacter sp. 15-1451 NODE_96_length_506_cov_1069.13, whole genome shotgun sequence 506
NZ_NHYN01000097.1 Helicobacter sp. 15-1451 NODE_97_length_485_cov_201.018, whole genome shotgun sequence 485
NZ_NHYN01000098.1 Helicobacter sp. 15-1451 NODE_98_length_476_cov_131.523, whole genome shotgun sequence 476
NZ_NHYN01000099.1 Helicobacter sp. 15-1451 NODE_99_length_459_cov_224.003, whole genome shotgun sequence 459
NZ_NHYN01000100.1 Helicobacter sp. 15-1451 NODE_100_length_459_cov_67.3389, whole genome shotgun sequence 459
NZ_NHYN01000101.1 Helicobacter sp. 15-1451 NODE_101_length_456_cov_81.8431, whole genome shotgun sequence 456
NZ_NHYN01000102.1 Helicobacter sp. 15-1451 NODE_102_length_441_cov_139.588, whole genome shotgun sequence 441
NZ_NHYN01000103.1 Helicobacter sp. 15-1451 NODE_103_length_428_cov_34.0699, whole genome shotgun sequence 428
NZ_NHYN01000104.1 Helicobacter sp. 15-1451 NODE_104_length_427_cov_92.2896, whole genome shotgun sequence 427
NZ_NHYN01000105.1 Helicobacter sp. 15-1451 NODE_105_length_422_cov_141.232, whole genome shotgun sequence 422
NZ_NHYN01000106.1 Helicobacter sp. 15-1451 NODE_106_length_421_cov_313.957, whole genome shotgun sequence 421
NZ_NHYN01000107.1 Helicobacter sp. 15-1451 NODE_107_length_419_cov_1122.04, whole genome shotgun sequence 419
NZ_NHYN01000108.1 Helicobacter sp. 15-1451 NODE_108_length_411_cov_49.0385, whole genome shotgun sequence 411
NZ_NHYN01000109.1 Helicobacter sp. 15-1451 NODE_109_length_405_cov_43.1863, whole genome shotgun sequence 405
NZ_NHYN01000110.1 Helicobacter sp. 15-1451 NODE_110_length_393_cov_54.2517, whole genome shotgun sequence 393
NZ_NHYN01000111.1 Helicobacter sp. 15-1451 NODE_111_length_386_cov_142.993, whole genome shotgun sequence 386
NZ_NHYN01000112.1 Helicobacter sp. 15-1451 NODE_112_length_382_cov_91.6996, whole genome shotgun sequence 382
NZ_NHYN01000113.1 Helicobacter sp. 15-1451 NODE_113_length_364_cov_554.826, whole genome shotgun sequence 364
NZ_NHYN01000114.1 Helicobacter sp. 15-1451 NODE_114_length_363_cov_76.4962, whole genome shotgun sequence 363
NZ_NHYN01000115.1 Helicobacter sp. 15-1451 NODE_115_length_362_cov_164.943, whole genome shotgun sequence 362
NZ_NHYN01000116.1 Helicobacter sp. 15-1451 NODE_116_length_361_cov_156.706, whole genome shotgun sequence 361
NZ_NHYN01000117.1 Helicobacter sp. 15-1451 NODE_117_length_355_cov_92, whole genome shotgun sequence 355
NZ_NHYN01000118.1 Helicobacter sp. 15-1451 NODE_118_length_352_cov_844.225, whole genome shotgun sequence 352
NZ_NHYN01000119.1 Helicobacter sp. 15-1451 NODE_119_length_351_cov_405.389, whole genome shotgun sequence 351
NZ_NHYN01000120.1 Helicobacter sp. 15-1451 NODE_120_length_351_cov_84.3135, whole genome shotgun sequence 351
NZ_NHYN01000121.1 Helicobacter sp. 15-1451 NODE_121_length_349_cov_48.96, whole genome shotgun sequence 349
NZ_NHYN01000122.1 Helicobacter sp. 15-1451 NODE_122_length_339_cov_325.354, whole genome shotgun sequence 339
NZ_NHYN01000123.1 Helicobacter sp. 15-1451 NODE_123_length_339_cov_302.479, whole genome shotgun sequence 339
NZ_NHYN01000124.1 Helicobacter sp. 15-1451 NODE_124_length_338_cov_91.523, whole genome shotgun sequence 338
NZ_NHYN01000125.1 Helicobacter sp. 15-1451 NODE_125_length_336_cov_161.553, whole genome shotgun sequence 336
NZ_NHYN01000126.1 Helicobacter sp. 15-1451 NODE_126_length_332_cov_203.974, whole genome shotgun sequence 332
NZ_NHYN01000127.1 Helicobacter sp. 15-1451 NODE_127_length_322_cov_41.2915, whole genome shotgun sequence 322
NZ_NHYN01000128.1 Helicobacter sp. 15-1451 NODE_128_length_319_cov_112.805, whole genome shotgun sequence 319
NZ_NHYN01000129.1 Helicobacter sp. 15-1451 NODE_130_length_316_cov_146.622, whole genome shotgun sequence 316
NZ_NHYN01000130.1 Helicobacter sp. 15-1451 NODE_131_length_313_cov_155.318, whole genome shotgun sequence 313
NZ_NHYN01000131.1 Helicobacter sp. 15-1451 NODE_133_length_309_cov_139.305, whole genome shotgun sequence 309

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory