fast.genomicscompare 6,575 genera of bacteria & archaea

 

OMPR01 sp900313015 C3M10

Genome identifier: GCF_003318155.1

NCBI assembly name: ASM331815v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, OMPR01, OMPR01 sp900313015

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Phaeobacter, Phaeobacter gallaeciensis

Scaffolds: 54

Genes: 4,584 Protein-coding: 4,488 RNAs: 50 pseudogenes: 46

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QOCE01000001.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_41, whole genome shotgun sequence 35,047
NZ_QOCE01000002.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_27, whole genome shotgun sequence 108,870
NZ_QOCE01000003.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_22, whole genome shotgun sequence 156,586
NZ_QOCE01000004.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_4, whole genome shotgun sequence 34,984
NZ_QOCE01000005.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_33, whole genome shotgun sequence 217,036
NZ_QOCE01000006.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_12, whole genome shotgun sequence 43,653
NZ_QOCE01000007.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_48, whole genome shotgun sequence 13,603
NZ_QOCE01000008.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_51, whole genome shotgun sequence 3,263
NZ_QOCE01000009.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_40, whole genome shotgun sequence 57,476
NZ_QOCE01000010.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_28, whole genome shotgun sequence 23,645
NZ_QOCE01000011.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_13, whole genome shotgun sequence 276,628
NZ_QOCE01000012.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_3, whole genome shotgun sequence 217,818
NZ_QOCE01000013.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_10, whole genome shotgun sequence 212,028
NZ_QOCE01000014.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_42, whole genome shotgun sequence 14,418
NZ_QOCE01000015.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_15, whole genome shotgun sequence 55,927
NZ_QOCE01000016.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_43, whole genome shotgun sequence 20,519
NZ_QOCE01000017.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_37, whole genome shotgun sequence 130,770
NZ_QOCE01000018.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_19, whole genome shotgun sequence 31,387
NZ_QOCE01000019.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_39, whole genome shotgun sequence 59,165
NZ_QOCE01000020.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_38, whole genome shotgun sequence 57,071
NZ_QOCE01000021.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_17, whole genome shotgun sequence 7,364
NZ_QOCE01000022.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_14, whole genome shotgun sequence 52,190
NZ_QOCE01000023.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_30, whole genome shotgun sequence 6,019
NZ_QOCE01000024.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_47, whole genome shotgun sequence 9,506
NZ_QOCE01000025.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_1, whole genome shotgun sequence 122,942
NZ_QOCE01000026.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_25, whole genome shotgun sequence 68,514
NZ_QOCE01000027.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_11, whole genome shotgun sequence 45,691
NZ_QOCE01000028.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_36, whole genome shotgun sequence 20,837
NZ_QOCE01000029.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_9, whole genome shotgun sequence 236,847
NZ_QOCE01000030.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_52, whole genome shotgun sequence 1,613
NZ_QOCE01000031.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_2, whole genome shotgun sequence 293,540
NZ_QOCE01000032.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_31, whole genome shotgun sequence 45,059
NZ_QOCE01000033.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_8, whole genome shotgun sequence 221,194
NZ_QOCE01000034.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_24, whole genome shotgun sequence 56,703
NZ_QOCE01000035.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_34, whole genome shotgun sequence 81,812
NZ_QOCE01000036.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_49, whole genome shotgun sequence 2,411
NZ_QOCE01000037.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_32, whole genome shotgun sequence 138,534
NZ_QOCE01000038.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_7, whole genome shotgun sequence 421,023
NZ_QOCE01000039.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_29, whole genome shotgun sequence 20,800
NZ_QOCE01000040.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_35, whole genome shotgun sequence 4,812
NZ_QOCE01000041.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_50, whole genome shotgun sequence 11,520
NZ_QOCE01000042.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_55, whole genome shotgun sequence 1,609
NZ_QOCE01000043.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_21, whole genome shotgun sequence 97,405
NZ_QOCE01000044.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_23, whole genome shotgun sequence 1,653
NZ_QOCE01000045.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_26, whole genome shotgun sequence 253,891
NZ_QOCE01000046.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_20, whole genome shotgun sequence 48,072
NZ_QOCE01000047.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_5, whole genome shotgun sequence 371,897
NZ_QOCE01000048.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_18, whole genome shotgun sequence 153,068
NZ_QOCE01000049.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_46, whole genome shotgun sequence 2,077
NZ_QOCE01000050.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_54, whole genome shotgun sequence 4,696
NZ_QOCE01000051.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_45, whole genome shotgun sequence 17,872
NZ_QOCE01000052.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_44, whole genome shotgun sequence 35,329
NZ_QOCE01000053.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_6, whole genome shotgun sequence 112,055
NZ_QOCE01000054.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_16, whole genome shotgun sequence 97,245

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory