fast.genomicscompare 6,575 genera of bacteria & archaea

 

Faecalibacterium prausnitzii ATCC 27768

Genome identifier: GCF_003324185.1

NCBI assembly name: ASM332418v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Faecalibacterium, Faecalibacterium prausnitzii

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Faecalibacterium, Faecalibacterium prausnitzii

Scaffolds: 76

Genes: 2,956 Protein-coding: 2,831 RNAs: 65 pseudogenes: 60

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_PXUP01000001.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_1_length_287407_cov_331.573, whole genome shotgun sequence 287,407
NZ_PXUP01000002.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_2_length_263609_cov_230.624, whole genome shotgun sequence 263,609
NZ_PXUP01000003.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_3_length_257234_cov_248.168, whole genome shotgun sequence 257,234
NZ_PXUP01000004.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_4_length_181235_cov_244.507, whole genome shotgun sequence 181,235
NZ_PXUP01000005.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_5_length_159723_cov_361.096, whole genome shotgun sequence 159,723
NZ_PXUP01000006.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_6_length_147341_cov_246.993, whole genome shotgun sequence 147,341
NZ_PXUP01000007.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_7_length_136845_cov_317.361, whole genome shotgun sequence 136,845
NZ_PXUP01000008.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_8_length_136767_cov_278.739, whole genome shotgun sequence 136,767
NZ_PXUP01000009.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_9_length_131131_cov_293.371, whole genome shotgun sequence 131,131
NZ_PXUP01000010.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_10_length_117152_cov_299.918, whole genome shotgun sequence 117,152
NZ_PXUP01000011.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_11_length_113711_cov_287.232, whole genome shotgun sequence 113,711
NZ_PXUP01000012.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_12_length_102274_cov_245.03, whole genome shotgun sequence 102,274
NZ_PXUP01000013.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_13_length_100412_cov_308.415, whole genome shotgun sequence 100,412
NZ_PXUP01000014.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_14_length_87867_cov_296.595, whole genome shotgun sequence 87,867
NZ_PXUP01000015.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_15_length_85674_cov_331.42, whole genome shotgun sequence 85,674
NZ_PXUP01000016.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_16_length_69439_cov_288.151, whole genome shotgun sequence 69,439
NZ_PXUP01000017.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_17_length_64581_cov_269.818, whole genome shotgun sequence 64,581
NZ_PXUP01000018.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_18_length_59788_cov_263.003, whole genome shotgun sequence 59,788
NZ_PXUP01000019.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_19_length_48852_cov_361.007, whole genome shotgun sequence 48,852
NZ_PXUP01000020.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_20_length_47315_cov_347.742, whole genome shotgun sequence 47,315
NZ_PXUP01000021.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_21_length_44795_cov_250.736, whole genome shotgun sequence 44,795
NZ_PXUP01000022.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_22_length_36948_cov_301.481, whole genome shotgun sequence 36,948
NZ_PXUP01000023.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_23_length_36372_cov_319.576, whole genome shotgun sequence 36,372
NZ_PXUP01000024.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_24_length_32265_cov_279.944, whole genome shotgun sequence 32,265
NZ_PXUP01000025.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_25_length_26512_cov_284.2, whole genome shotgun sequence 26,512
NZ_PXUP01000026.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_26_length_16440_cov_381.407, whole genome shotgun sequence 16,440
NZ_PXUP01000027.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_27_length_15197_cov_302.558, whole genome shotgun sequence 15,197
NZ_PXUP01000028.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_28_length_14783_cov_413.219, whole genome shotgun sequence 14,783
NZ_PXUP01000029.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_29_length_14654_cov_351.389, whole genome shotgun sequence 14,654
NZ_PXUP01000030.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_30_length_13863_cov_307.599, whole genome shotgun sequence 13,863
NZ_PXUP01000031.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_31_length_13468_cov_377.58, whole genome shotgun sequence 13,468
NZ_PXUP01000032.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_32_length_12564_cov_371.768, whole genome shotgun sequence 12,564
NZ_PXUP01000033.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_33_length_12505_cov_257.707, whole genome shotgun sequence 12,505
NZ_PXUP01000034.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_34_length_11773_cov_331.703, whole genome shotgun sequence 11,773
NZ_PXUP01000035.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_35_length_9748_cov_291.372, whole genome shotgun sequence 9,748
NZ_PXUP01000036.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_36_length_9400_cov_330.174, whole genome shotgun sequence 9,400
NZ_PXUP01000037.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_37_length_9319_cov_290.259, whole genome shotgun sequence 9,319
NZ_PXUP01000038.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_38_length_8204_cov_335.307, whole genome shotgun sequence 8,204
NZ_PXUP01000039.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_39_length_8012_cov_293.651, whole genome shotgun sequence 8,012
NZ_PXUP01000040.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_40_length_7801_cov_599.665, whole genome shotgun sequence 7,801
NZ_PXUP01000041.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_41_length_7397_cov_287.115, whole genome shotgun sequence 7,397
NZ_PXUP01000042.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_42_length_6797_cov_253.497, whole genome shotgun sequence 6,797
NZ_PXUP01000043.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_43_length_6695_cov_1020.36, whole genome shotgun sequence 6,695
NZ_PXUP01000044.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_44_length_6661_cov_331.61, whole genome shotgun sequence 6,661
NZ_PXUP01000045.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_47_length_3960_cov_301.289, whole genome shotgun sequence 3,960
NZ_PXUP01000046.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_48_length_3429_cov_351.996, whole genome shotgun sequence 3,429
NZ_PXUP01000047.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_49_length_3236_cov_2459.22, whole genome shotgun sequence 3,236
NZ_PXUP01000048.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_50_length_3118_cov_705.274, whole genome shotgun sequence 3,118
NZ_PXUP01000049.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_51_length_2412_cov_252.091, whole genome shotgun sequence 2,412
NZ_PXUP01000050.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_52_length_2317_cov_2136.54, whole genome shotgun sequence 2,317
NZ_PXUP01000051.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_54_length_2059_cov_617.074, whole genome shotgun sequence 2,059
NZ_PXUP01000052.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_55_length_2042_cov_355.101, whole genome shotgun sequence 2,042
NZ_PXUP01000053.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_58_length_1752_cov_696.124, whole genome shotgun sequence 1,752
NZ_PXUP01000054.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_59_length_1732_cov_988.292, whole genome shotgun sequence 1,732
NZ_PXUP01000055.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_60_length_1729_cov_324.77, whole genome shotgun sequence 1,729
NZ_PXUP01000056.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_62_length_1661_cov_2164.29, whole genome shotgun sequence 1,661
NZ_PXUP01000057.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_63_length_1608_cov_1052.86, whole genome shotgun sequence 1,608
NZ_PXUP01000058.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_64_length_1588_cov_609.093, whole genome shotgun sequence 1,588
NZ_PXUP01000059.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_65_length_1533_cov_868.571, whole genome shotgun sequence 1,533
NZ_PXUP01000060.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_66_length_1494_cov_749.993, whole genome shotgun sequence 1,494
NZ_PXUP01000061.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_67_length_1427_cov_351.203, whole genome shotgun sequence 1,427
NZ_PXUP01000062.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_68_length_1392_cov_47.4008, whole genome shotgun sequence 1,392
NZ_PXUP01000063.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_69_length_1351_cov_355.688, whole genome shotgun sequence 1,351
NZ_PXUP01000064.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_70_length_1300_cov_540.253, whole genome shotgun sequence 1,300
NZ_PXUP01000065.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_73_length_1182_cov_565.393, whole genome shotgun sequence 1,182
NZ_PXUP01000066.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_74_length_1110_cov_608.111, whole genome shotgun sequence 1,110
NZ_PXUP01000067.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_75_length_1032_cov_700.29, whole genome shotgun sequence 1,032
NZ_PXUP01000068.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_78_length_954_cov_515.047, whole genome shotgun sequence 954
NZ_PXUP01000069.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_82_length_828_cov_604.008, whole genome shotgun sequence 828
NZ_PXUP01000070.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_84_length_744_cov_455.901, whole genome shotgun sequence 744
NZ_PXUP01000071.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_88_length_669_cov_937.34, whole genome shotgun sequence 669
NZ_PXUP01000072.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_91_length_652_cov_1268.72, whole genome shotgun sequence 652
NZ_PXUP01000073.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_94_length_618_cov_863.566, whole genome shotgun sequence 618
NZ_PXUP01000074.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_95_length_618_cov_603.54, whole genome shotgun sequence 618
NZ_PXUP01000075.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_100_length_572_cov_365.695, whole genome shotgun sequence 572
NZ_PXUP01000076.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_113_length_517_cov_485.507, whole genome shotgun sequence 517

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory