fast.genomicscompare 6,575 genera of bacteria & archaea

 

Oceanihabitans sediminis S9-10

Genome identifier: GCF_003337215.1

NCBI assembly name: ASM333721v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Oceanihabitans, Oceanihabitans sediminis

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Oceanihabitans, Oceanihabitans sediminis

Scaffolds: 20

Genes: 2,655 Protein-coding: 2,603 RNAs: 46 pseudogenes: 6

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QPIG01000001.1 Oceanihabitans sediminis strain S9-10 contig1_1, whole genome shotgun sequence 1,280,206
NZ_QPIG01000002.1 Oceanihabitans sediminis strain S9-10 contig2_1, whole genome shotgun sequence 570,785
NZ_QPIG01000003.1 Oceanihabitans sediminis strain S9-10 contig3_1, whole genome shotgun sequence 398,310
NZ_QPIG01000004.1 Oceanihabitans sediminis strain S9-10 contig4_1, whole genome shotgun sequence 261,075
NZ_QPIG01000005.1 Oceanihabitans sediminis strain S9-10 contig5_1, whole genome shotgun sequence 244,467
NZ_QPIG01000006.1 Oceanihabitans sediminis strain S9-10 contig6_1, whole genome shotgun sequence 99,847
NZ_QPIG01000007.1 Oceanihabitans sediminis strain S9-10 contig7_1, whole genome shotgun sequence 19,894
NZ_QPIG01000008.1 Oceanihabitans sediminis strain S9-10 contig8_1, whole genome shotgun sequence 7,648
NZ_QPIG01000009.1 Oceanihabitans sediminis strain S9-10 contig9_1, whole genome shotgun sequence 5,950
NZ_QPIG01000010.1 Oceanihabitans sediminis strain S9-10 contig10_1, whole genome shotgun sequence 5,579
NZ_QPIG01000011.1 Oceanihabitans sediminis strain S9-10 contig11_1, whole genome shotgun sequence 3,256
NZ_QPIG01000012.1 Oceanihabitans sediminis strain S9-10 contig12_1, whole genome shotgun sequence 2,929
NZ_QPIG01000013.1 Oceanihabitans sediminis strain S9-10 contig13_1, whole genome shotgun sequence 1,477
NZ_QPIG01000014.1 Oceanihabitans sediminis strain S9-10 contig14_1, whole genome shotgun sequence 1,468
NZ_QPIG01000015.1 Oceanihabitans sediminis strain S9-10 contig15_1, whole genome shotgun sequence 1,309
NZ_QPIG01000016.1 Oceanihabitans sediminis strain S9-10 contig16_1, whole genome shotgun sequence 967
NZ_QPIG01000017.1 Oceanihabitans sediminis strain S9-10 contig17_1, whole genome shotgun sequence 958
NZ_QPIG01000018.1 Oceanihabitans sediminis strain S9-10 contig18_1, whole genome shotgun sequence 848
NZ_QPIG01000019.1 Oceanihabitans sediminis strain S9-10 contig19_1, whole genome shotgun sequence 594
NZ_QPIG01000020.1 Oceanihabitans sediminis strain S9-10 contig20_1, whole genome shotgun sequence 575

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory