fast.genomicscompare 6,575 genera of bacteria & archaea

 

Ferruginivarius sediminum WD2A32

Genome identifier: GCF_003344765.1

NCBI assembly name: ASM334476v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Kiloniellales, Rhodovibrionaceae, Ferruginivarius, Ferruginivarius sediminum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Rhodospirillaceae, Ferruginivarius, Ferruginivarius sediminum

Scaffolds: 65

Genes: 4,021 Protein-coding: 3,939 RNAs: 56 pseudogenes: 26

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QPMH01000001.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold1, whole genome shotgun sequence 405,662
NZ_QPMH01000002.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold2, whole genome shotgun sequence 397,483
NZ_QPMH01000003.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold3, whole genome shotgun sequence 356,689
NZ_QPMH01000004.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold4, whole genome shotgun sequence 308,863
NZ_QPMH01000005.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold5, whole genome shotgun sequence 255,611
NZ_QPMH01000006.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold6, whole genome shotgun sequence 248,556
NZ_QPMH01000007.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold7, whole genome shotgun sequence 195,903
NZ_QPMH01000008.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold8, whole genome shotgun sequence 182,430
NZ_QPMH01000009.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold9, whole genome shotgun sequence 150,831
NZ_QPMH01000010.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold10, whole genome shotgun sequence 127,534
NZ_QPMH01000011.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold11, whole genome shotgun sequence 114,442
NZ_QPMH01000012.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold12, whole genome shotgun sequence 112,485
NZ_QPMH01000013.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold13, whole genome shotgun sequence 106,356
NZ_QPMH01000014.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold14, whole genome shotgun sequence 101,161
NZ_QPMH01000015.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold15, whole genome shotgun sequence 98,922
NZ_QPMH01000016.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold16, whole genome shotgun sequence 78,899
NZ_QPMH01000017.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold17, whole genome shotgun sequence 72,128
NZ_QPMH01000018.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold18, whole genome shotgun sequence 71,810
NZ_QPMH01000019.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold19, whole genome shotgun sequence 69,711
NZ_QPMH01000020.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold20, whole genome shotgun sequence 68,026
NZ_QPMH01000021.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold21, whole genome shotgun sequence 62,811
NZ_QPMH01000022.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold22, whole genome shotgun sequence 60,306
NZ_QPMH01000023.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold23, whole genome shotgun sequence 47,639
NZ_QPMH01000024.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold24, whole genome shotgun sequence 47,104
NZ_QPMH01000025.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold25, whole genome shotgun sequence 46,978
NZ_QPMH01000026.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold26, whole genome shotgun sequence 46,831
NZ_QPMH01000027.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold27, whole genome shotgun sequence 43,841
NZ_QPMH01000028.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold28, whole genome shotgun sequence 43,355
NZ_QPMH01000029.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold29, whole genome shotgun sequence 39,655
NZ_QPMH01000030.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold30, whole genome shotgun sequence 31,779
NZ_QPMH01000031.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold31, whole genome shotgun sequence 26,563
NZ_QPMH01000032.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold32, whole genome shotgun sequence 23,976
NZ_QPMH01000033.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold33, whole genome shotgun sequence 21,857
NZ_QPMH01000034.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold34, whole genome shotgun sequence 21,527
NZ_QPMH01000035.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold35, whole genome shotgun sequence 17,054
NZ_QPMH01000036.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold36, whole genome shotgun sequence 17,036
NZ_QPMH01000037.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold37, whole genome shotgun sequence 16,183
NZ_QPMH01000038.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold38, whole genome shotgun sequence 14,839
NZ_QPMH01000039.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold39, whole genome shotgun sequence 13,428
NZ_QPMH01000040.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold40, whole genome shotgun sequence 9,363
NZ_QPMH01000041.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold41, whole genome shotgun sequence 8,141
NZ_QPMH01000042.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold42, whole genome shotgun sequence 5,647
NZ_QPMH01000043.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold43, whole genome shotgun sequence 5,537
NZ_QPMH01000044.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold44, whole genome shotgun sequence 5,001
NZ_QPMH01000045.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold45, whole genome shotgun sequence 3,786
NZ_QPMH01000046.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold46, whole genome shotgun sequence 3,763
NZ_QPMH01000047.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold47, whole genome shotgun sequence 3,725
NZ_QPMH01000048.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold48, whole genome shotgun sequence 2,464
NZ_QPMH01000049.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold49, whole genome shotgun sequence 2,029
NZ_QPMH01000050.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold50, whole genome shotgun sequence 1,977
NZ_QPMH01000051.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold51, whole genome shotgun sequence 1,940
NZ_QPMH01000052.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold52, whole genome shotgun sequence 1,559
NZ_QPMH01000053.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold53, whole genome shotgun sequence 1,557
NZ_QPMH01000054.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold54, whole genome shotgun sequence 1,345
NZ_QPMH01000055.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold55, whole genome shotgun sequence 1,301
NZ_QPMH01000056.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold57, whole genome shotgun sequence 1,161
NZ_QPMH01000057.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold58, whole genome shotgun sequence 1,130
NZ_QPMH01000058.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold59, whole genome shotgun sequence 1,115
NZ_QPMH01000059.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold60, whole genome shotgun sequence 1,108
NZ_QPMH01000060.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold61, whole genome shotgun sequence 791
NZ_QPMH01000061.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold62, whole genome shotgun sequence 740
NZ_QPMH01000062.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold64, whole genome shotgun sequence 553
NZ_QPMH01000063.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold68, whole genome shotgun sequence 527
NZ_QPMH01000064.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold69, whole genome shotgun sequence 525
NZ_QPMH01000065.1 Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold72, whole genome shotgun sequence 507

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory