fast.genomicscompare 6,575 genera of bacteria & archaea

 

Gluconacetobacter liquefaciens DSM 5603

Genome identifier: GCF_003350405.1

NCBI assembly name: ASM335040v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Acetobacterales, Acetobacteraceae, Gluconacetobacter, Gluconacetobacter liquefaciens

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Acetobacteraceae, Gluconacetobacter, Gluconacetobacter liquefaciens

Scaffolds: 31

Genes: 3,753 Protein-coding: 3,612 RNAs: 57 pseudogenes: 84

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QQAW01000001.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_101, whole genome shotgun sequence 731,161
NZ_QQAW01000002.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_102, whole genome shotgun sequence 679,788
NZ_QQAW01000003.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_103, whole genome shotgun sequence 458,844
NZ_QQAW01000004.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_104, whole genome shotgun sequence 336,215
NZ_QQAW01000005.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_105, whole genome shotgun sequence 334,151
NZ_QQAW01000006.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_106, whole genome shotgun sequence 274,075
NZ_QQAW01000007.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_107, whole genome shotgun sequence 218,241
NZ_QQAW01000008.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_108, whole genome shotgun sequence 196,939
NZ_QQAW01000009.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_109, whole genome shotgun sequence 147,303
NZ_QQAW01000010.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_110, whole genome shotgun sequence 118,931
NZ_QQAW01000011.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_111, whole genome shotgun sequence 103,408
NZ_QQAW01000012.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_112, whole genome shotgun sequence 103,371
NZ_QQAW01000013.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_113, whole genome shotgun sequence 84,071
NZ_QQAW01000014.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_114, whole genome shotgun sequence 73,201
NZ_QQAW01000015.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_115, whole genome shotgun sequence 67,957
NZ_QQAW01000016.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_116, whole genome shotgun sequence 52,725
NZ_QQAW01000017.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_117, whole genome shotgun sequence 46,988
NZ_QQAW01000018.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_118, whole genome shotgun sequence 45,199
NZ_QQAW01000019.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_119, whole genome shotgun sequence 42,619
NZ_QQAW01000020.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_120, whole genome shotgun sequence 15,269
NZ_QQAW01000021.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_121, whole genome shotgun sequence 14,465
NZ_QQAW01000022.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_122, whole genome shotgun sequence 7,478
NZ_QQAW01000023.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_123, whole genome shotgun sequence 6,374
NZ_QQAW01000024.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_124, whole genome shotgun sequence 5,542
NZ_QQAW01000025.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_125, whole genome shotgun sequence 2,518
NZ_QQAW01000026.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_126, whole genome shotgun sequence 2,452
NZ_QQAW01000027.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_127, whole genome shotgun sequence 2,198
NZ_QQAW01000028.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_128, whole genome shotgun sequence 1,781
NZ_QQAW01000029.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_129, whole genome shotgun sequence 1,482
NZ_QQAW01000030.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_130, whole genome shotgun sequence 1,161
NZ_QQAW01000031.1 Gluconacetobacter liquefaciens strain DSM 5603 Ga0215678_131, whole genome shotgun sequence 1,037

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory