fast.genomicscompare 6,575 genera of bacteria & archaea

 

Microvirga subterranea DSM 14364

Genome identifier: GCF_003350535.1

NCBI assembly name: ASM335053v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Beijerinckiaceae, Microvirga, Microvirga subterranea

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Methylobacteriaceae, Microvirga, Microvirga subterranea

Scaffolds: 36

Genes: 4,947 Protein-coding: 4,808 RNAs: 71 pseudogenes: 68

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QQBB01000001.1 Microvirga subterranea strain DSM 14364 Ga0244528_101, whole genome shotgun sequence 1,000,883
NZ_QQBB01000002.1 Microvirga subterranea strain DSM 14364 Ga0244528_102, whole genome shotgun sequence 686,042
NZ_QQBB01000003.1 Microvirga subterranea strain DSM 14364 Ga0244528_103, whole genome shotgun sequence 540,914
NZ_QQBB01000004.1 Microvirga subterranea strain DSM 14364 Ga0244528_104, whole genome shotgun sequence 519,753
NZ_QQBB01000005.1 Microvirga subterranea strain DSM 14364 Ga0244528_105, whole genome shotgun sequence 468,339
NZ_QQBB01000006.1 Microvirga subterranea strain DSM 14364 Ga0244528_106, whole genome shotgun sequence 420,068
NZ_QQBB01000007.1 Microvirga subterranea strain DSM 14364 Ga0244528_107, whole genome shotgun sequence 316,965
NZ_QQBB01000008.1 Microvirga subterranea strain DSM 14364 Ga0244528_108, whole genome shotgun sequence 183,358
NZ_QQBB01000009.1 Microvirga subterranea strain DSM 14364 Ga0244528_109, whole genome shotgun sequence 136,236
NZ_QQBB01000010.1 Microvirga subterranea strain DSM 14364 Ga0244528_110, whole genome shotgun sequence 114,368
NZ_QQBB01000011.1 Microvirga subterranea strain DSM 14364 Ga0244528_111, whole genome shotgun sequence 91,162
NZ_QQBB01000012.1 Microvirga subterranea strain DSM 14364 Ga0244528_112, whole genome shotgun sequence 88,725
NZ_QQBB01000013.1 Microvirga subterranea strain DSM 14364 Ga0244528_113, whole genome shotgun sequence 86,701
NZ_QQBB01000014.1 Microvirga subterranea strain DSM 14364 Ga0244528_114, whole genome shotgun sequence 86,059
NZ_QQBB01000015.1 Microvirga subterranea strain DSM 14364 Ga0244528_115, whole genome shotgun sequence 56,777
NZ_QQBB01000016.1 Microvirga subterranea strain DSM 14364 Ga0244528_116, whole genome shotgun sequence 49,923
NZ_QQBB01000017.1 Microvirga subterranea strain DSM 14364 Ga0244528_117, whole genome shotgun sequence 48,365
NZ_QQBB01000018.1 Microvirga subterranea strain DSM 14364 Ga0244528_118, whole genome shotgun sequence 46,456
NZ_QQBB01000019.1 Microvirga subterranea strain DSM 14364 Ga0244528_119, whole genome shotgun sequence 45,258
NZ_QQBB01000020.1 Microvirga subterranea strain DSM 14364 Ga0244528_120, whole genome shotgun sequence 39,426
NZ_QQBB01000021.1 Microvirga subterranea strain DSM 14364 Ga0244528_121, whole genome shotgun sequence 24,422
NZ_QQBB01000022.1 Microvirga subterranea strain DSM 14364 Ga0244528_122, whole genome shotgun sequence 16,018
NZ_QQBB01000023.1 Microvirga subterranea strain DSM 14364 Ga0244528_123, whole genome shotgun sequence 15,426
NZ_QQBB01000024.1 Microvirga subterranea strain DSM 14364 Ga0244528_124, whole genome shotgun sequence 13,564
NZ_QQBB01000025.1 Microvirga subterranea strain DSM 14364 Ga0244528_125, whole genome shotgun sequence 13,372
NZ_QQBB01000026.1 Microvirga subterranea strain DSM 14364 Ga0244528_126, whole genome shotgun sequence 7,635
NZ_QQBB01000027.1 Microvirga subterranea strain DSM 14364 Ga0244528_127, whole genome shotgun sequence 6,588
NZ_QQBB01000028.1 Microvirga subterranea strain DSM 14364 Ga0244528_128, whole genome shotgun sequence 5,645
NZ_QQBB01000029.1 Microvirga subterranea strain DSM 14364 Ga0244528_129, whole genome shotgun sequence 4,055
NZ_QQBB01000030.1 Microvirga subterranea strain DSM 14364 Ga0244528_130, whole genome shotgun sequence 3,843
NZ_QQBB01000031.1 Microvirga subterranea strain DSM 14364 Ga0244528_131, whole genome shotgun sequence 3,445
NZ_QQBB01000032.1 Microvirga subterranea strain DSM 14364 Ga0244528_132, whole genome shotgun sequence 2,653
NZ_QQBB01000033.1 Microvirga subterranea strain DSM 14364 Ga0244528_133, whole genome shotgun sequence 1,642
NZ_QQBB01000034.1 Microvirga subterranea strain DSM 14364 Ga0244528_134, whole genome shotgun sequence 1,481
NZ_QQBB01000035.1 Microvirga subterranea strain DSM 14364 Ga0244528_135, whole genome shotgun sequence 1,153
NZ_QQBB01000036.1 Microvirga subterranea strain DSM 14364 Ga0244528_136, whole genome shotgun sequence 1,082

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory