fast.genomicscompare 6,575 genera of bacteria & archaea

 

Dyella solisilvae DHG54

Genome identifier: GCF_003351225.1

NCBI assembly name: ASM335122v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Rhodanobacteraceae, Dyella, Dyella solisilvae

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Rhodanobacteraceae, Dyella, Dyella solisilvae

Scaffolds: 17

Genes: 4,037 Protein-coding: 3,962 RNAs: 55 pseudogenes: 20

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QQSY01000001.1 Dyella solisilvae strain DHG54 scaffold1, whole genome shotgun sequence 1,659,441
NZ_QQSY01000002.1 Dyella solisilvae strain DHG54 scaffold2, whole genome shotgun sequence 1,129,964
NZ_QQSY01000003.1 Dyella solisilvae strain DHG54 scaffold3, whole genome shotgun sequence 559,607
NZ_QQSY01000004.1 Dyella solisilvae strain DHG54 scaffold4, whole genome shotgun sequence 329,645
NZ_QQSY01000005.1 Dyella solisilvae strain DHG54 scaffold5, whole genome shotgun sequence 268,740
NZ_QQSY01000006.1 Dyella solisilvae strain DHG54 scaffold6, whole genome shotgun sequence 192,060
NZ_QQSY01000007.1 Dyella solisilvae strain DHG54 scaffold7, whole genome shotgun sequence 149,053
NZ_QQSY01000008.1 Dyella solisilvae strain DHG54 scaffold8, whole genome shotgun sequence 98,871
NZ_QQSY01000009.1 Dyella solisilvae strain DHG54 scaffold9, whole genome shotgun sequence 94,699
NZ_QQSY01000010.1 Dyella solisilvae strain DHG54 scaffold10, whole genome shotgun sequence 36,622
NZ_QQSY01000011.1 Dyella solisilvae strain DHG54 scaffold11, whole genome shotgun sequence 32,139
NZ_QQSY01000012.1 Dyella solisilvae strain DHG54 scaffold12, whole genome shotgun sequence 18,842
NZ_QQSY01000013.1 Dyella solisilvae strain DHG54 scaffold13, whole genome shotgun sequence 16,525
NZ_QQSY01000014.1 Dyella solisilvae strain DHG54 scaffold14, whole genome shotgun sequence 6,889
NZ_QQSY01000015.1 Dyella solisilvae strain DHG54 scaffold15, whole genome shotgun sequence 5,538
NZ_QQSY01000016.1 Dyella solisilvae strain DHG54 scaffold16, whole genome shotgun sequence 1,854
NZ_QQSY01000017.1 Dyella solisilvae strain DHG54 scaffold17, whole genome shotgun sequence 1,399

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory