fast.genomicscompare 6,575 genera of bacteria & archaea

 

Marinirhabdus gelatinilytica DSM 101478

Genome identifier: GCF_003353425.1

NCBI assembly name: ASM335342v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Marinirhabdus, Marinirhabdus gelatinilytica

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Marinirhabdus, Marinirhabdus gelatinilytica

Scaffolds: 24

Genes: 3,036 Protein-coding: 2,984 RNAs: 40 pseudogenes: 12

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QRAO01000001.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_101, whole genome shotgun sequence 1,304,074
NZ_QRAO01000002.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_102, whole genome shotgun sequence 653,197
NZ_QRAO01000003.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_103, whole genome shotgun sequence 471,940
NZ_QRAO01000004.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_104, whole genome shotgun sequence 294,477
NZ_QRAO01000005.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_105, whole genome shotgun sequence 211,833
NZ_QRAO01000006.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_106, whole genome shotgun sequence 93,705
NZ_QRAO01000007.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_107, whole genome shotgun sequence 83,959
NZ_QRAO01000008.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_108, whole genome shotgun sequence 71,301
NZ_QRAO01000009.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_109, whole genome shotgun sequence 34,500
NZ_QRAO01000010.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_110, whole genome shotgun sequence 16,829
NZ_QRAO01000011.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_111, whole genome shotgun sequence 10,745
NZ_QRAO01000012.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_112, whole genome shotgun sequence 8,135
NZ_QRAO01000013.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_113, whole genome shotgun sequence 7,306
NZ_QRAO01000014.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_114, whole genome shotgun sequence 6,526
NZ_QRAO01000015.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_115, whole genome shotgun sequence 5,723
NZ_QRAO01000016.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_116, whole genome shotgun sequence 4,028
NZ_QRAO01000017.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_117, whole genome shotgun sequence 3,728
NZ_QRAO01000018.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_118, whole genome shotgun sequence 2,969
NZ_QRAO01000019.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_119, whole genome shotgun sequence 2,467
NZ_QRAO01000020.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_120, whole genome shotgun sequence 1,705
NZ_QRAO01000021.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_121, whole genome shotgun sequence 1,235
NZ_QRAO01000022.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_122, whole genome shotgun sequence 1,222
NZ_QRAO01000023.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_123, whole genome shotgun sequence 1,220
NZ_QRAO01000024.1 Marinirhabdus gelatinilytica strain DSM 101478 Ga0215720_124, whole genome shotgun sequence 1,169

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory