fast.genomicscompare 6,575 genera of bacteria & archaea

 

Helicobacter_G brantae MIT 04-9366

Genome identifier: GCF_003364205.1

NCBI assembly name: ASM336420v1

GTDB taxonomy: Bacteria, Campylobacterota, Campylobacteria, Campylobacterales, Helicobacteraceae, Helicobacter_G, Helicobacter_G brantae

NCBI taxonomy: Bacteria, Campylobacterota, Epsilonproteobacteria, Campylobacterales, Helicobacteraceae, Helicobacter, Helicobacter brantae

Scaffolds: 37

Genes: 1,638 Protein-coding: 1,589 RNAs: 43 pseudogenes: 6

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_NXLV01000001.1 Helicobacter brantae strain MIT 04-9366 _1_26798435.9826, whole genome shotgun sequence 267,984
NZ_NXLV01000002.1 Helicobacter brantae strain MIT 04-9366 _2_20200242.2607, whole genome shotgun sequence 202,002
NZ_NXLV01000003.1 Helicobacter brantae strain MIT 04-9366 _3_14869442.8368, whole genome shotgun sequence 148,694
NZ_NXLV01000004.1 Helicobacter brantae strain MIT 04-9366 _4_14438537.1113, whole genome shotgun sequence 144,385
NZ_NXLV01000005.1 Helicobacter brantae strain MIT 04-9366 _5_13347436.696, whole genome shotgun sequence 133,474
NZ_NXLV01000006.1 Helicobacter brantae strain MIT 04-9366 _6_9302236.4555, whole genome shotgun sequence 93,022
NZ_NXLV01000007.1 Helicobacter brantae strain MIT 04-9366 _7_7357038.3502, whole genome shotgun sequence 73,570
NZ_NXLV01000008.1 Helicobacter brantae strain MIT 04-9366 _8_7040538.9463, whole genome shotgun sequence 70,405
NZ_NXLV01000009.1 Helicobacter brantae strain MIT 04-9366 _9_6176241.1773, whole genome shotgun sequence 61,762
NZ_NXLV01000010.1 Helicobacter brantae strain MIT 04-9366 _10_5553342.5579, whole genome shotgun sequence 55,533
NZ_NXLV01000011.1 Helicobacter brantae strain MIT 04-9366 _11_5210836.5646, whole genome shotgun sequence 52,108
NZ_NXLV01000012.1 Helicobacter brantae strain MIT 04-9366 _12_4353142.9297, whole genome shotgun sequence 43,531
NZ_NXLV01000013.1 Helicobacter brantae strain MIT 04-9366 _13_4292734.8566, whole genome shotgun sequence 42,927
NZ_NXLV01000014.1 Helicobacter brantae strain MIT 04-9366 _14_4251841.619, whole genome shotgun sequence 42,518
NZ_NXLV01000015.1 Helicobacter brantae strain MIT 04-9366 _15_4195440.839, whole genome shotgun sequence 41,954
NZ_NXLV01000016.1 Helicobacter brantae strain MIT 04-9366 _16_4001637.8297, whole genome shotgun sequence 40,016
NZ_NXLV01000017.1 Helicobacter brantae strain MIT 04-9366 _17_3611345.7916, whole genome shotgun sequence 36,113
NZ_NXLV01000018.1 Helicobacter brantae strain MIT 04-9366 _18_3595938.2764, whole genome shotgun sequence 35,959
NZ_NXLV01000019.1 Helicobacter brantae strain MIT 04-9366 _19_2424035.2396, whole genome shotgun sequence 24,240
NZ_NXLV01000020.1 Helicobacter brantae strain MIT 04-9366 _20_2423237.226, whole genome shotgun sequence 24,232
NZ_NXLV01000021.1 Helicobacter brantae strain MIT 04-9366 _21_2328343.335, whole genome shotgun sequence 23,283
NZ_NXLV01000022.1 Helicobacter brantae strain MIT 04-9366 _22_2200842.2205, whole genome shotgun sequence 22,008
NZ_NXLV01000023.1 Helicobacter brantae strain MIT 04-9366 _23_1412237.9342, whole genome shotgun sequence 14,122
NZ_NXLV01000024.1 Helicobacter brantae strain MIT 04-9366 _24_1287147.0329, whole genome shotgun sequence 12,871
NZ_NXLV01000025.1 Helicobacter brantae strain MIT 04-9366 _25_701852.7148, whole genome shotgun sequence 7,018
NZ_NXLV01000026.1 Helicobacter brantae strain MIT 04-9366 _26_580290.737, whole genome shotgun sequence 5,802
NZ_NXLV01000027.1 Helicobacter brantae strain MIT 04-9366 _27_255353.4059, whole genome shotgun sequence 2,553
NZ_NXLV01000028.1 Helicobacter brantae strain MIT 04-9366 _28_208250.2259, whole genome shotgun sequence 2,082
NZ_NXLV01000029.1 Helicobacter brantae strain MIT 04-9366 _29_194258.6533, whole genome shotgun sequence 1,942
NZ_NXLV01000030.1 Helicobacter brantae strain MIT 04-9366 _30_104041.1041, whole genome shotgun sequence 1,040
NZ_NXLV01000031.1 Helicobacter brantae strain MIT 04-9366 _31_71996.5823, whole genome shotgun sequence 719
NZ_NXLV01000032.1 Helicobacter brantae strain MIT 04-9366 _32_69084.11, whole genome shotgun sequence 690
NZ_NXLV01000033.1 Helicobacter brantae strain MIT 04-9366 _33_667119.519, whole genome shotgun sequence 667
NZ_NXLV01000034.1 Helicobacter brantae strain MIT 04-9366 _35_48621.1189, whole genome shotgun sequence 486
NZ_NXLV01000035.1 Helicobacter brantae strain MIT 04-9366 _46_35968.35, whole genome shotgun sequence 359
NZ_NXLV01000036.1 Helicobacter brantae strain MIT 04-9366 _48_34666.5344, whole genome shotgun sequence 346
NZ_NXLV01000037.1 Helicobacter brantae strain MIT 04-9366 _49_34346.5492, whole genome shotgun sequence 343

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory