fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sphingorhabdus_B pulchriflava GY_G

Genome identifier: GCF_003367235.1

NCBI assembly name: ASM336723v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingorhabdus_B, Sphingorhabdus_B pulchriflava

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingorhabdus, Sphingorhabdus pulchriflava

Scaffolds: 6

Genes: 3,204 Protein-coding: 3,145 RNAs: 50 pseudogenes: 9

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QRGP01000001.1 Sphingorhabdus pulchriflava strain GY_G G_1, whole genome shotgun sequence 2,155,120
NZ_QRGP01000002.1 Sphingorhabdus pulchriflava strain GY_G G_2, whole genome shotgun sequence 686,594
NZ_QRGP01000003.1 Sphingorhabdus pulchriflava strain GY_G G_3, whole genome shotgun sequence 372,297
NZ_QRGP01000004.1 Sphingorhabdus pulchriflava strain GY_G G_4, whole genome shotgun sequence 2,294
NZ_QRGP01000005.1 Sphingorhabdus pulchriflava strain GY_G G_5, whole genome shotgun sequence 2,289
NZ_QRGP01000006.1 Sphingorhabdus pulchriflava strain GY_G G_6, whole genome shotgun sequence 1,225

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory