fast.genomicscompare 6,575 genera of bacteria & archaea

 

Halorussus rarus TBN4

Genome identifier: GCF_003369835.1

NCBI assembly name: ASM336983v1

GTDB taxonomy: Archaea, Halobacteriota, Halobacteria, Halobacteriales, Haladaptataceae, Halorussus, Halorussus rarus

NCBI taxonomy: Archaea, Euryarchaeota, Halobacteria, Halobacteriales, Haladaptataceae, Halorussus, Halorussus rarus

Scaffolds: 7

Genes: 4,393 Protein-coding: 4,311 RNAs: 57 pseudogenes: 25

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QPMJ01000001.1 Halorussus rarus strain TBN4 Scaffold1_1, whole genome shotgun sequence 1,713,681
NZ_QPMJ01000002.1 Halorussus rarus strain TBN4 Scaffold2_1, whole genome shotgun sequence 1,580,738
NZ_QPMJ01000003.1 Halorussus rarus strain TBN4 Scaffold3_1, whole genome shotgun sequence 516,876
NZ_QPMJ01000004.1 Halorussus rarus strain TBN4 Scaffold4_1, whole genome shotgun sequence 395,042
NZ_QPMJ01000005.1 Halorussus rarus strain TBN4 Scaffold5_1, whole genome shotgun sequence 145,231
NZ_QPMJ01000006.1 Halorussus rarus strain TBN4 Scaffold6_1, whole genome shotgun sequence 15,435
NZ_QPMJ01000007.1 Halorussus rarus strain TBN4 Scaffold7_1, whole genome shotgun sequence 5,174

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory