fast.genomicscompare 6,575 genera of bacteria & archaea

 

Rhodosalinus sediminis WDN1C137

Genome identifier: GCF_003385555.1

NCBI assembly name: ASM338555v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Rhodosalinus, Rhodosalinus sediminis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Rhodosalinus, Rhodosalinus sediminis

Scaffolds: 124

Genes: 3,125 Protein-coding: 3,014 RNAs: 51 pseudogenes: 60

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QOHR01000001.1 Rhodosalinus sediminis strain WDN1C137 scaffold1, whole genome shotgun sequence 381,874
NZ_QOHR01000002.1 Rhodosalinus sediminis strain WDN1C137 scaffold2, whole genome shotgun sequence 345,073
NZ_QOHR01000003.1 Rhodosalinus sediminis strain WDN1C137 scaffold3, whole genome shotgun sequence 238,048
NZ_QOHR01000004.1 Rhodosalinus sediminis strain WDN1C137 scaffold4, whole genome shotgun sequence 233,214
NZ_QOHR01000005.1 Rhodosalinus sediminis strain WDN1C137 scaffold5, whole genome shotgun sequence 222,693
NZ_QOHR01000006.1 Rhodosalinus sediminis strain WDN1C137 scaffold6, whole genome shotgun sequence 152,489
NZ_QOHR01000007.1 Rhodosalinus sediminis strain WDN1C137 scaffold7, whole genome shotgun sequence 112,421
NZ_QOHR01000008.1 Rhodosalinus sediminis strain WDN1C137 scaffold8, whole genome shotgun sequence 88,220
NZ_QOHR01000009.1 Rhodosalinus sediminis strain WDN1C137 scaffold9, whole genome shotgun sequence 84,087
NZ_QOHR01000010.1 Rhodosalinus sediminis strain WDN1C137 scaffold10, whole genome shotgun sequence 81,918
NZ_QOHR01000011.1 Rhodosalinus sediminis strain WDN1C137 scaffold11, whole genome shotgun sequence 79,261
NZ_QOHR01000012.1 Rhodosalinus sediminis strain WDN1C137 scaffold12, whole genome shotgun sequence 70,663
NZ_QOHR01000013.1 Rhodosalinus sediminis strain WDN1C137 scaffold13, whole genome shotgun sequence 70,618
NZ_QOHR01000014.1 Rhodosalinus sediminis strain WDN1C137 scaffold14, whole genome shotgun sequence 70,503
NZ_QOHR01000015.1 Rhodosalinus sediminis strain WDN1C137 scaffold15, whole genome shotgun sequence 61,695
NZ_QOHR01000016.1 Rhodosalinus sediminis strain WDN1C137 scaffold16, whole genome shotgun sequence 61,300
NZ_QOHR01000017.1 Rhodosalinus sediminis strain WDN1C137 scaffold17, whole genome shotgun sequence 60,529
NZ_QOHR01000018.1 Rhodosalinus sediminis strain WDN1C137 scaffold18, whole genome shotgun sequence 59,551
NZ_QOHR01000019.1 Rhodosalinus sediminis strain WDN1C137 scaffold19, whole genome shotgun sequence 55,354
NZ_QOHR01000020.1 Rhodosalinus sediminis strain WDN1C137 scaffold20, whole genome shotgun sequence 52,352
NZ_QOHR01000021.1 Rhodosalinus sediminis strain WDN1C137 scaffold21, whole genome shotgun sequence 50,769
NZ_QOHR01000022.1 Rhodosalinus sediminis strain WDN1C137 scaffold22, whole genome shotgun sequence 42,523
NZ_QOHR01000023.1 Rhodosalinus sediminis strain WDN1C137 scaffold23, whole genome shotgun sequence 39,372
NZ_QOHR01000024.1 Rhodosalinus sediminis strain WDN1C137 scaffold24, whole genome shotgun sequence 32,221
NZ_QOHR01000025.1 Rhodosalinus sediminis strain WDN1C137 scaffold25, whole genome shotgun sequence 28,169
NZ_QOHR01000026.1 Rhodosalinus sediminis strain WDN1C137 scaffold26, whole genome shotgun sequence 19,894
NZ_QOHR01000027.1 Rhodosalinus sediminis strain WDN1C137 scaffold27, whole genome shotgun sequence 19,744
NZ_QOHR01000028.1 Rhodosalinus sediminis strain WDN1C137 scaffold28, whole genome shotgun sequence 19,363
NZ_QOHR01000029.1 Rhodosalinus sediminis strain WDN1C137 scaffold29, whole genome shotgun sequence 17,948
NZ_QOHR01000030.1 Rhodosalinus sediminis strain WDN1C137 scaffold30, whole genome shotgun sequence 17,171
NZ_QOHR01000031.1 Rhodosalinus sediminis strain WDN1C137 scaffold31, whole genome shotgun sequence 13,934
NZ_QOHR01000032.1 Rhodosalinus sediminis strain WDN1C137 scaffold32, whole genome shotgun sequence 13,458
NZ_QOHR01000033.1 Rhodosalinus sediminis strain WDN1C137 scaffold33, whole genome shotgun sequence 12,894
NZ_QOHR01000034.1 Rhodosalinus sediminis strain WDN1C137 scaffold34, whole genome shotgun sequence 12,113
NZ_QOHR01000035.1 Rhodosalinus sediminis strain WDN1C137 scaffold35, whole genome shotgun sequence 12,056
NZ_QOHR01000036.1 Rhodosalinus sediminis strain WDN1C137 scaffold36, whole genome shotgun sequence 11,596
NZ_QOHR01000037.1 Rhodosalinus sediminis strain WDN1C137 scaffold37, whole genome shotgun sequence 11,280
NZ_QOHR01000038.1 Rhodosalinus sediminis strain WDN1C137 scaffold38, whole genome shotgun sequence 11,218
NZ_QOHR01000039.1 Rhodosalinus sediminis strain WDN1C137 scaffold39, whole genome shotgun sequence 11,058
NZ_QOHR01000040.1 Rhodosalinus sediminis strain WDN1C137 scaffold40, whole genome shotgun sequence 10,808
NZ_QOHR01000041.1 Rhodosalinus sediminis strain WDN1C137 scaffold41, whole genome shotgun sequence 10,610
NZ_QOHR01000042.1 Rhodosalinus sediminis strain WDN1C137 scaffold42, whole genome shotgun sequence 9,836
NZ_QOHR01000043.1 Rhodosalinus sediminis strain WDN1C137 scaffold43, whole genome shotgun sequence 9,253
NZ_QOHR01000044.1 Rhodosalinus sediminis strain WDN1C137 scaffold44, whole genome shotgun sequence 8,369
NZ_QOHR01000045.1 Rhodosalinus sediminis strain WDN1C137 scaffold45, whole genome shotgun sequence 7,615
NZ_QOHR01000046.1 Rhodosalinus sediminis strain WDN1C137 scaffold46, whole genome shotgun sequence 7,517
NZ_QOHR01000047.1 Rhodosalinus sediminis strain WDN1C137 scaffold47, whole genome shotgun sequence 7,449
NZ_QOHR01000048.1 Rhodosalinus sediminis strain WDN1C137 scaffold48, whole genome shotgun sequence 6,856
NZ_QOHR01000049.1 Rhodosalinus sediminis strain WDN1C137 scaffold49, whole genome shotgun sequence 6,446
NZ_QOHR01000050.1 Rhodosalinus sediminis strain WDN1C137 scaffold50, whole genome shotgun sequence 6,397
NZ_QOHR01000051.1 Rhodosalinus sediminis strain WDN1C137 scaffold51, whole genome shotgun sequence 5,645
NZ_QOHR01000052.1 Rhodosalinus sediminis strain WDN1C137 scaffold52, whole genome shotgun sequence 4,542
NZ_QOHR01000053.1 Rhodosalinus sediminis strain WDN1C137 scaffold53, whole genome shotgun sequence 4,434
NZ_QOHR01000054.1 Rhodosalinus sediminis strain WDN1C137 scaffold54, whole genome shotgun sequence 3,517
NZ_QOHR01000055.1 Rhodosalinus sediminis strain WDN1C137 scaffold55, whole genome shotgun sequence 3,370
NZ_QOHR01000056.1 Rhodosalinus sediminis strain WDN1C137 scaffold56, whole genome shotgun sequence 3,362
NZ_QOHR01000057.1 Rhodosalinus sediminis strain WDN1C137 scaffold57, whole genome shotgun sequence 3,206
NZ_QOHR01000058.1 Rhodosalinus sediminis strain WDN1C137 scaffold58, whole genome shotgun sequence 2,977
NZ_QOHR01000059.1 Rhodosalinus sediminis strain WDN1C137 scaffold59, whole genome shotgun sequence 2,973
NZ_QOHR01000060.1 Rhodosalinus sediminis strain WDN1C137 scaffold60, whole genome shotgun sequence 2,507
NZ_QOHR01000061.1 Rhodosalinus sediminis strain WDN1C137 scaffold61, whole genome shotgun sequence 1,481
NZ_QOHR01000062.1 Rhodosalinus sediminis strain WDN1C137 scaffold62, whole genome shotgun sequence 2,395
NZ_QOHR01000063.1 Rhodosalinus sediminis strain WDN1C137 scaffold63, whole genome shotgun sequence 2,354
NZ_QOHR01000064.1 Rhodosalinus sediminis strain WDN1C137 scaffold64, whole genome shotgun sequence 2,323
NZ_QOHR01000065.1 Rhodosalinus sediminis strain WDN1C137 scaffold65, whole genome shotgun sequence 2,227
NZ_QOHR01000066.1 Rhodosalinus sediminis strain WDN1C137 scaffold66, whole genome shotgun sequence 1,745
NZ_QOHR01000067.1 Rhodosalinus sediminis strain WDN1C137 scaffold67, whole genome shotgun sequence 1,708
NZ_QOHR01000068.1 Rhodosalinus sediminis strain WDN1C137 scaffold68, whole genome shotgun sequence 1,700
NZ_QOHR01000069.1 Rhodosalinus sediminis strain WDN1C137 scaffold69, whole genome shotgun sequence 1,310
NZ_QOHR01000070.1 Rhodosalinus sediminis strain WDN1C137 scaffold70, whole genome shotgun sequence 1,295
NZ_QOHR01000071.1 Rhodosalinus sediminis strain WDN1C137 scaffold71, whole genome shotgun sequence 1,270
NZ_QOHR01000072.1 Rhodosalinus sediminis strain WDN1C137 scaffold72, whole genome shotgun sequence 1,191
NZ_QOHR01000073.1 Rhodosalinus sediminis strain WDN1C137 scaffold73, whole genome shotgun sequence 1,188
NZ_QOHR01000074.1 Rhodosalinus sediminis strain WDN1C137 scaffold74, whole genome shotgun sequence 1,137
NZ_QOHR01000075.1 Rhodosalinus sediminis strain WDN1C137 scaffold75, whole genome shotgun sequence 1,074
NZ_QOHR01000076.1 Rhodosalinus sediminis strain WDN1C137 scaffold77, whole genome shotgun sequence 1,026
NZ_QOHR01000077.1 Rhodosalinus sediminis strain WDN1C137 scaffold78, whole genome shotgun sequence 984
NZ_QOHR01000078.1 Rhodosalinus sediminis strain WDN1C137 scaffold79, whole genome shotgun sequence 929
NZ_QOHR01000079.1 Rhodosalinus sediminis strain WDN1C137 scaffold81, whole genome shotgun sequence 851
NZ_QOHR01000080.1 Rhodosalinus sediminis strain WDN1C137 scaffold82, whole genome shotgun sequence 816
NZ_QOHR01000081.1 Rhodosalinus sediminis strain WDN1C137 scaffold83, whole genome shotgun sequence 794
NZ_QOHR01000082.1 Rhodosalinus sediminis strain WDN1C137 scaffold84, whole genome shotgun sequence 773
NZ_QOHR01000083.1 Rhodosalinus sediminis strain WDN1C137 scaffold85, whole genome shotgun sequence 742
NZ_QOHR01000084.1 Rhodosalinus sediminis strain WDN1C137 scaffold87, whole genome shotgun sequence 711
NZ_QOHR01000085.1 Rhodosalinus sediminis strain WDN1C137 scaffold88, whole genome shotgun sequence 687
NZ_QOHR01000086.1 Rhodosalinus sediminis strain WDN1C137 scaffold89, whole genome shotgun sequence 648
NZ_QOHR01000087.1 Rhodosalinus sediminis strain WDN1C137 scaffold90, whole genome shotgun sequence 646
NZ_QOHR01000088.1 Rhodosalinus sediminis strain WDN1C137 scaffold91, whole genome shotgun sequence 637
NZ_QOHR01000089.1 Rhodosalinus sediminis strain WDN1C137 scaffold93, whole genome shotgun sequence 623
NZ_QOHR01000090.1 Rhodosalinus sediminis strain WDN1C137 scaffold94, whole genome shotgun sequence 616
NZ_QOHR01000091.1 Rhodosalinus sediminis strain WDN1C137 scaffold95, whole genome shotgun sequence 594
NZ_QOHR01000092.1 Rhodosalinus sediminis strain WDN1C137 scaffold96, whole genome shotgun sequence 585
NZ_QOHR01000093.1 Rhodosalinus sediminis strain WDN1C137 scaffold97, whole genome shotgun sequence 560
NZ_QOHR01000094.1 Rhodosalinus sediminis strain WDN1C137 scaffold98, whole genome shotgun sequence 543
NZ_QOHR01000095.1 Rhodosalinus sediminis strain WDN1C137 scaffold99, whole genome shotgun sequence 534
NZ_QOHR01000096.1 Rhodosalinus sediminis strain WDN1C137 scaffold100, whole genome shotgun sequence 533
NZ_QOHR01000097.1 Rhodosalinus sediminis strain WDN1C137 scaffold101, whole genome shotgun sequence 516
NZ_QOHR01000098.1 Rhodosalinus sediminis strain WDN1C137 scaffold103, whole genome shotgun sequence 493
NZ_QOHR01000099.1 Rhodosalinus sediminis strain WDN1C137 scaffold104, whole genome shotgun sequence 484
NZ_QOHR01000100.1 Rhodosalinus sediminis strain WDN1C137 scaffold105, whole genome shotgun sequence 482
NZ_QOHR01000101.1 Rhodosalinus sediminis strain WDN1C137 scaffold106, whole genome shotgun sequence 475
NZ_QOHR01000102.1 Rhodosalinus sediminis strain WDN1C137 scaffold107, whole genome shotgun sequence 469
NZ_QOHR01000103.1 Rhodosalinus sediminis strain WDN1C137 scaffold108, whole genome shotgun sequence 461
NZ_QOHR01000104.1 Rhodosalinus sediminis strain WDN1C137 scaffold109, whole genome shotgun sequence 440
NZ_QOHR01000105.1 Rhodosalinus sediminis strain WDN1C137 scaffold110, whole genome shotgun sequence 429
NZ_QOHR01000106.1 Rhodosalinus sediminis strain WDN1C137 scaffold111, whole genome shotgun sequence 406
NZ_QOHR01000107.1 Rhodosalinus sediminis strain WDN1C137 scaffold112, whole genome shotgun sequence 387
NZ_QOHR01000108.1 Rhodosalinus sediminis strain WDN1C137 scaffold113, whole genome shotgun sequence 379
NZ_QOHR01000109.1 Rhodosalinus sediminis strain WDN1C137 scaffold114, whole genome shotgun sequence 379
NZ_QOHR01000110.1 Rhodosalinus sediminis strain WDN1C137 scaffold115, whole genome shotgun sequence 360
NZ_QOHR01000111.1 Rhodosalinus sediminis strain WDN1C137 scaffold116, whole genome shotgun sequence 341
NZ_QOHR01000112.1 Rhodosalinus sediminis strain WDN1C137 scaffold118, whole genome shotgun sequence 326
NZ_QOHR01000113.1 Rhodosalinus sediminis strain WDN1C137 scaffold119, whole genome shotgun sequence 323
NZ_QOHR01000114.1 Rhodosalinus sediminis strain WDN1C137 scaffold120, whole genome shotgun sequence 322
NZ_QOHR01000115.1 Rhodosalinus sediminis strain WDN1C137 scaffold121, whole genome shotgun sequence 318
NZ_QOHR01000116.1 Rhodosalinus sediminis strain WDN1C137 scaffold122, whole genome shotgun sequence 317
NZ_QOHR01000117.1 Rhodosalinus sediminis strain WDN1C137 scaffold123, whole genome shotgun sequence 317
NZ_QOHR01000118.1 Rhodosalinus sediminis strain WDN1C137 scaffold124, whole genome shotgun sequence 315
NZ_QOHR01000119.1 Rhodosalinus sediminis strain WDN1C137 scaffold125, whole genome shotgun sequence 314
NZ_QOHR01000120.1 Rhodosalinus sediminis strain WDN1C137 scaffold126, whole genome shotgun sequence 310
NZ_QOHR01000121.1 Rhodosalinus sediminis strain WDN1C137 scaffold127, whole genome shotgun sequence 306
NZ_QOHR01000122.1 Rhodosalinus sediminis strain WDN1C137 scaffold128, whole genome shotgun sequence 305
NZ_QOHR01000123.1 Rhodosalinus sediminis strain WDN1C137 scaffold129, whole genome shotgun sequence 305
NZ_QOHR01000124.1 Rhodosalinus sediminis strain WDN1C137 scaffold130, whole genome shotgun sequence 304

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory