fast.genomicscompare 6,575 genera of bacteria & archaea

 

Seonamhaeicola aphaedonensis CECT 8487

Genome identifier: GCF_003386195.1

NCBI assembly name: ASM338619v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Seonamhaeicola, Seonamhaeicola aphaedonensis

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Seonamhaeicola, Seonamhaeicola aphaedonensis

Scaffolds: 41

Genes: 3,010 Protein-coding: 2,950 RNAs: 47 pseudogenes: 13

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QRDX01000001.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_101, whole genome shotgun sequence 864,023
NZ_QRDX01000002.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_102, whole genome shotgun sequence 462,066
NZ_QRDX01000003.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_103, whole genome shotgun sequence 410,439
NZ_QRDX01000004.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_104, whole genome shotgun sequence 363,669
NZ_QRDX01000005.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_105, whole genome shotgun sequence 331,640
NZ_QRDX01000006.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_106, whole genome shotgun sequence 326,924
NZ_QRDX01000007.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_107, whole genome shotgun sequence 244,571
NZ_QRDX01000008.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_108, whole genome shotgun sequence 162,740
NZ_QRDX01000009.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_109, whole genome shotgun sequence 139,902
NZ_QRDX01000010.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_110, whole genome shotgun sequence 103,242
NZ_QRDX01000011.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_111, whole genome shotgun sequence 18,544
NZ_QRDX01000012.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_112, whole genome shotgun sequence 6,685
NZ_QRDX01000013.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_113, whole genome shotgun sequence 6,306
NZ_QRDX01000014.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_114, whole genome shotgun sequence 5,680
NZ_QRDX01000015.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_115, whole genome shotgun sequence 5,532
NZ_QRDX01000016.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_116, whole genome shotgun sequence 4,831
NZ_QRDX01000017.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_117, whole genome shotgun sequence 4,727
NZ_QRDX01000018.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_118, whole genome shotgun sequence 3,995
NZ_QRDX01000019.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_119, whole genome shotgun sequence 3,825
NZ_QRDX01000020.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_120, whole genome shotgun sequence 2,960
NZ_QRDX01000021.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_121, whole genome shotgun sequence 2,864
NZ_QRDX01000022.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_122, whole genome shotgun sequence 2,858
NZ_QRDX01000023.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_123, whole genome shotgun sequence 2,639
NZ_QRDX01000024.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_124, whole genome shotgun sequence 2,310
NZ_QRDX01000025.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_125, whole genome shotgun sequence 1,967
NZ_QRDX01000026.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_126, whole genome shotgun sequence 1,940
NZ_QRDX01000027.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_127, whole genome shotgun sequence 1,928
NZ_QRDX01000028.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_128, whole genome shotgun sequence 1,921
NZ_QRDX01000029.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_129, whole genome shotgun sequence 1,846
NZ_QRDX01000030.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_130, whole genome shotgun sequence 1,833
NZ_QRDX01000031.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_131, whole genome shotgun sequence 1,678
NZ_QRDX01000032.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_132, whole genome shotgun sequence 1,543
NZ_QRDX01000033.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_133, whole genome shotgun sequence 1,483
NZ_QRDX01000034.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_134, whole genome shotgun sequence 1,366
NZ_QRDX01000035.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_135, whole genome shotgun sequence 1,309
NZ_QRDX01000036.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_136, whole genome shotgun sequence 1,261
NZ_QRDX01000037.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_137, whole genome shotgun sequence 1,190
NZ_QRDX01000038.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_138, whole genome shotgun sequence 1,098
NZ_QRDX01000039.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_139, whole genome shotgun sequence 1,095
NZ_QRDX01000040.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_140, whole genome shotgun sequence 1,083
NZ_QRDX01000041.1 Seonamhaeicola aphaedonensis strain CECT 8487 Ga0244636_141, whole genome shotgun sequence 1,068

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory