fast.genomicscompare 6,575 genera of bacteria & archaea

 

Perlucidibaca baekdonensis DSM 26022

Genome identifier: GCF_003387535.1

NCBI assembly name: ASM338753v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Moraxellaceae, Perlucidibaca, Perlucidibaca baekdonensis

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Moraxellales, Moraxellaceae, Paraperlucidibaca, Paraperlucidibaca baekdonensis

Scaffolds: 10

Genes: 2,194 Protein-coding: 2,111 RNAs: 49 pseudogenes: 34

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QUNR01000001.1 Paraperlucidibaca baekdonensis strain DSM 26022 Ga0244564_101, whole genome shotgun sequence 818,875
NZ_QUNR01000002.1 Paraperlucidibaca baekdonensis strain DSM 26022 Ga0244564_102, whole genome shotgun sequence 538,467
NZ_QUNR01000003.1 Paraperlucidibaca baekdonensis strain DSM 26022 Ga0244564_103, whole genome shotgun sequence 464,424
NZ_QUNR01000004.1 Paraperlucidibaca baekdonensis strain DSM 26022 Ga0244564_104, whole genome shotgun sequence 386,391
NZ_QUNR01000005.1 Paraperlucidibaca baekdonensis strain DSM 26022 Ga0244564_105, whole genome shotgun sequence 36,550
NZ_QUNR01000006.1 Paraperlucidibaca baekdonensis strain DSM 26022 Ga0244564_106, whole genome shotgun sequence 29,269
NZ_QUNR01000007.1 Paraperlucidibaca baekdonensis strain DSM 26022 Ga0244564_107, whole genome shotgun sequence 12,719
NZ_QUNR01000008.1 Paraperlucidibaca baekdonensis strain DSM 26022 Ga0244564_108, whole genome shotgun sequence 5,709
NZ_QUNR01000009.1 Paraperlucidibaca baekdonensis strain DSM 26022 Ga0244564_109, whole genome shotgun sequence 1,850
NZ_QUNR01000010.1 Paraperlucidibaca baekdonensis strain DSM 26022 Ga0244564_110, whole genome shotgun sequence 1,329

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory