fast.genomicscompare 6,575 genera of bacteria & archaea

 

Marixanthomonas ophiurae KMM 3046

Genome identifier: GCF_003413745.1

NCBI assembly name: ASM341374v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Marixanthomonas, Marixanthomonas ophiurae

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Marixanthomonas, Marixanthomonas ophiurae

Scaffolds: 6

Genes: 3,028 Protein-coding: 2,978 RNAs: 43 pseudogenes: 7

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QVID01000001.1 Marixanthomonas ophiurae strain KMM 3046 contig1, whole genome shotgun sequence 2,255,088
NZ_QVID01000002.1 Marixanthomonas ophiurae strain KMM 3046 contig2, whole genome shotgun sequence 967,929
NZ_QVID01000003.1 Marixanthomonas ophiurae strain KMM 3046 contig3, whole genome shotgun sequence 69,511
NZ_QVID01000004.1 Marixanthomonas ophiurae strain KMM 3046 contig4, whole genome shotgun sequence 5,564
NZ_QVID01000005.1 Marixanthomonas ophiurae strain KMM 3046 contig5, whole genome shotgun sequence 3,921
NZ_QVID01000006.1 Marixanthomonas ophiurae strain KMM 3046 contig6, whole genome shotgun sequence 1,231

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory