fast.genomicscompare 6,575 genera of bacteria & archaea

 

OM05-12 sp003438995 OM05-12

Genome identifier: GCF_003438995.1

NCBI assembly name: ASM343899v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Bacteroidaceae, OM05-12, OM05-12 sp003438995

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Bacteroidaceae, Bacteroides

Scaffolds: 64

Genes: 3,564 Protein-coding: 3,453 RNAs: 66 pseudogenes: 45

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QSUN01000001.1 Bacteroides sp. OM05-12 OM05-12.Scaf1, whole genome shotgun sequence 515,448
NZ_QSUN01000002.1 Bacteroides sp. OM05-12 OM05-12.Scaf2, whole genome shotgun sequence 445,944
NZ_QSUN01000003.1 Bacteroides sp. OM05-12 OM05-12.Scaf3, whole genome shotgun sequence 384,476
NZ_QSUN01000004.1 Bacteroides sp. OM05-12 OM05-12.Scaf4, whole genome shotgun sequence 328,102
NZ_QSUN01000005.1 Bacteroides sp. OM05-12 OM05-12.Scaf5, whole genome shotgun sequence 299,128
NZ_QSUN01000006.1 Bacteroides sp. OM05-12 OM05-12.Scaf6, whole genome shotgun sequence 178,900
NZ_QSUN01000007.1 Bacteroides sp. OM05-12 OM05-12.Scaf7, whole genome shotgun sequence 178,294
NZ_QSUN01000008.1 Bacteroides sp. OM05-12 OM05-12.Scaf8, whole genome shotgun sequence 148,566
NZ_QSUN01000009.1 Bacteroides sp. OM05-12 OM05-12.Scaf9, whole genome shotgun sequence 121,174
NZ_QSUN01000010.1 Bacteroides sp. OM05-12 OM05-12.Scaf10, whole genome shotgun sequence 108,843
NZ_QSUN01000011.1 Bacteroides sp. OM05-12 OM05-12.Scaf11, whole genome shotgun sequence 103,181
NZ_QSUN01000012.1 Bacteroides sp. OM05-12 OM05-12.Scaf12, whole genome shotgun sequence 101,982
NZ_QSUN01000013.1 Bacteroides sp. OM05-12 OM05-12.Scaf13, whole genome shotgun sequence 101,275
NZ_QSUN01000014.1 Bacteroides sp. OM05-12 OM05-12.Scaf14, whole genome shotgun sequence 95,476
NZ_QSUN01000015.1 Bacteroides sp. OM05-12 OM05-12.Scaf15, whole genome shotgun sequence 93,277
NZ_QSUN01000016.1 Bacteroides sp. OM05-12 OM05-12.Scaf16, whole genome shotgun sequence 83,367
NZ_QSUN01000017.1 Bacteroides sp. OM05-12 OM05-12.Scaf17, whole genome shotgun sequence 79,123
NZ_QSUN01000018.1 Bacteroides sp. OM05-12 OM05-12.Scaf18, whole genome shotgun sequence 78,575
NZ_QSUN01000019.1 Bacteroides sp. OM05-12 OM05-12.Scaf19, whole genome shotgun sequence 76,443
NZ_QSUN01000020.1 Bacteroides sp. OM05-12 OM05-12.Scaf20, whole genome shotgun sequence 73,988
NZ_QSUN01000021.1 Bacteroides sp. OM05-12 OM05-12.Scaf21, whole genome shotgun sequence 71,069
NZ_QSUN01000022.1 Bacteroides sp. OM05-12 OM05-12.Scaf22, whole genome shotgun sequence 66,663
NZ_QSUN01000023.1 Bacteroides sp. OM05-12 OM05-12.Scaf23, whole genome shotgun sequence 60,807
NZ_QSUN01000024.1 Bacteroides sp. OM05-12 OM05-12.Scaf24, whole genome shotgun sequence 57,249
NZ_QSUN01000025.1 Bacteroides sp. OM05-12 OM05-12.Scaf25, whole genome shotgun sequence 46,154
NZ_QSUN01000026.1 Bacteroides sp. OM05-12 OM05-12.Scaf26, whole genome shotgun sequence 44,709
NZ_QSUN01000027.1 Bacteroides sp. OM05-12 OM05-12.Scaf27, whole genome shotgun sequence 38,758
NZ_QSUN01000028.1 Bacteroides sp. OM05-12 OM05-12.Scaf28, whole genome shotgun sequence 37,250
NZ_QSUN01000029.1 Bacteroides sp. OM05-12 OM05-12.Scaf29, whole genome shotgun sequence 36,074
NZ_QSUN01000030.1 Bacteroides sp. OM05-12 OM05-12.Scaf30, whole genome shotgun sequence 35,283
NZ_QSUN01000031.1 Bacteroides sp. OM05-12 OM05-12.Scaf31, whole genome shotgun sequence 34,410
NZ_QSUN01000032.1 Bacteroides sp. OM05-12 OM05-12.Scaf32, whole genome shotgun sequence 32,765
NZ_QSUN01000033.1 Bacteroides sp. OM05-12 OM05-12.Scaf33, whole genome shotgun sequence 30,731
NZ_QSUN01000034.1 Bacteroides sp. OM05-12 OM05-12.Scaf34, whole genome shotgun sequence 30,140
NZ_QSUN01000035.1 Bacteroides sp. OM05-12 OM05-12.Scaf35, whole genome shotgun sequence 27,878
NZ_QSUN01000036.1 Bacteroides sp. OM05-12 OM05-12.Scaf36, whole genome shotgun sequence 27,570
NZ_QSUN01000037.1 Bacteroides sp. OM05-12 OM05-12.Scaf37, whole genome shotgun sequence 23,765
NZ_QSUN01000038.1 Bacteroides sp. OM05-12 OM05-12.Scaf38, whole genome shotgun sequence 23,007
NZ_QSUN01000039.1 Bacteroides sp. OM05-12 OM05-12.Scaf39, whole genome shotgun sequence 20,232
NZ_QSUN01000040.1 Bacteroides sp. OM05-12 OM05-12.Scaf40, whole genome shotgun sequence 19,962
NZ_QSUN01000041.1 Bacteroides sp. OM05-12 OM05-12.Scaf41, whole genome shotgun sequence 19,091
NZ_QSUN01000042.1 Bacteroides sp. OM05-12 OM05-12.Scaf42, whole genome shotgun sequence 18,439
NZ_QSUN01000043.1 Bacteroides sp. OM05-12 OM05-12.Scaf43, whole genome shotgun sequence 16,852
NZ_QSUN01000044.1 Bacteroides sp. OM05-12 OM05-12.Scaf44, whole genome shotgun sequence 13,835
NZ_QSUN01000045.1 Bacteroides sp. OM05-12 OM05-12.Scaf45, whole genome shotgun sequence 8,245
NZ_QSUN01000046.1 Bacteroides sp. OM05-12 OM05-12.Scaf46, whole genome shotgun sequence 8,029
NZ_QSUN01000047.1 Bacteroides sp. OM05-12 OM05-12.Scaf47, whole genome shotgun sequence 4,821
NZ_QSUN01000048.1 Bacteroides sp. OM05-12 OM05-12.Scaf48, whole genome shotgun sequence 3,839
NZ_QSUN01000049.1 Bacteroides sp. OM05-12 OM05-12.Scaf49, whole genome shotgun sequence 3,036
NZ_QSUN01000050.1 Bacteroides sp. OM05-12 OM05-12.Scaf50, whole genome shotgun sequence 2,872
NZ_QSUN01000051.1 Bacteroides sp. OM05-12 OM05-12.Scaf51, whole genome shotgun sequence 2,653
NZ_QSUN01000052.1 Bacteroides sp. OM05-12 OM05-12.Scaf52, whole genome shotgun sequence 2,486
NZ_QSUN01000053.1 Bacteroides sp. OM05-12 OM05-12.Scaf53, whole genome shotgun sequence 2,139
NZ_QSUN01000054.1 Bacteroides sp. OM05-12 OM05-12.Scaf54, whole genome shotgun sequence 1,357
NZ_QSUN01000055.1 Bacteroides sp. OM05-12 OM05-12.Scaf55, whole genome shotgun sequence 1,297
NZ_QSUN01000056.1 Bacteroides sp. OM05-12 OM05-12.Scaf56, whole genome shotgun sequence 945
NZ_QSUN01000057.1 Bacteroides sp. OM05-12 OM05-12.Scaf57, whole genome shotgun sequence 929
NZ_QSUN01000058.1 Bacteroides sp. OM05-12 OM05-12.Scaf58, whole genome shotgun sequence 903
NZ_QSUN01000059.1 Bacteroides sp. OM05-12 OM05-12.Scaf59, whole genome shotgun sequence 781
NZ_QSUN01000060.1 Bacteroides sp. OM05-12 OM05-12.Scaf60, whole genome shotgun sequence 745
NZ_QSUN01000061.1 Bacteroides sp. OM05-12 OM05-12.Scaf61, whole genome shotgun sequence 672
NZ_QSUN01000062.1 Bacteroides sp. OM05-12 OM05-12.Scaf62, whole genome shotgun sequence 627
NZ_QSUN01000063.1 Bacteroides sp. OM05-12 OM05-12.Scaf63, whole genome shotgun sequence 552
NZ_QSUN01000064.1 Bacteroides sp. OM05-12 OM05-12.Scaf64, whole genome shotgun sequence 552

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory