fast.genomicscompare 6,575 genera of bacteria & archaea

 

Eubacterium_G sp000435815 AF36-5BH

Genome identifier: GCF_003460505.1

NCBI assembly name: ASM346050v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Eubacterium_G, Eubacterium_G sp000435815

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Eubacteriaceae, Eubacterium

Scaffolds: 23

Genes: 2,392 Protein-coding: 2,310 RNAs: 55 pseudogenes: 27

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QTVG01000001.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf1, whole genome shotgun sequence 339,295
NZ_QTVG01000002.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf2, whole genome shotgun sequence 339,073
NZ_QTVG01000003.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf3, whole genome shotgun sequence 319,539
NZ_QTVG01000004.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf4, whole genome shotgun sequence 311,164
NZ_QTVG01000005.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf5, whole genome shotgun sequence 283,431
NZ_QTVG01000006.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf6, whole genome shotgun sequence 267,540
NZ_QTVG01000007.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf7, whole genome shotgun sequence 258,018
NZ_QTVG01000008.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf8, whole genome shotgun sequence 111,394
NZ_QTVG01000009.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf9, whole genome shotgun sequence 103,656
NZ_QTVG01000010.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf10, whole genome shotgun sequence 96,228
NZ_QTVG01000011.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf11, whole genome shotgun sequence 79,243
NZ_QTVG01000012.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf12, whole genome shotgun sequence 59,751
NZ_QTVG01000013.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf13, whole genome shotgun sequence 53,712
NZ_QTVG01000014.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf14, whole genome shotgun sequence 53,177
NZ_QTVG01000015.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf15, whole genome shotgun sequence 16,530
NZ_QTVG01000016.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf16, whole genome shotgun sequence 13,490
NZ_QTVG01000017.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf17, whole genome shotgun sequence 5,259
NZ_QTVG01000018.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf18, whole genome shotgun sequence 4,882
NZ_QTVG01000019.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf19, whole genome shotgun sequence 4,160
NZ_QTVG01000020.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf20, whole genome shotgun sequence 3,837
NZ_QTVG01000021.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf21, whole genome shotgun sequence 3,476
NZ_QTVG01000022.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf22, whole genome shotgun sequence 1,438
NZ_QTVG01000023.1 Eubacterium sp. AF36-5BH AF36-5BH.Scaf23, whole genome shotgun sequence 987

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory