fast.genomicscompare 6,575 genera of bacteria & archaea

 

Blautia_A acetigignens AF31-8BH

Genome identifier: GCF_003460605.1

NCBI assembly name: ASM346060v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Blautia_A, Blautia_A acetigignens

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Ruminococcus

Scaffolds: 52

Genes: 4,384 Protein-coding: 4,186 RNAs: 63 pseudogenes: 135

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QTVN01000001.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf1, whole genome shotgun sequence 530,243
NZ_QTVN01000002.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf2, whole genome shotgun sequence 366,739
NZ_QTVN01000003.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf3, whole genome shotgun sequence 352,618
NZ_QTVN01000004.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf4, whole genome shotgun sequence 300,333
NZ_QTVN01000005.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf5, whole genome shotgun sequence 283,677
NZ_QTVN01000006.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf6, whole genome shotgun sequence 254,509
NZ_QTVN01000007.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf7, whole genome shotgun sequence 238,815
NZ_QTVN01000008.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf8, whole genome shotgun sequence 234,359
NZ_QTVN01000009.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf9, whole genome shotgun sequence 233,331
NZ_QTVN01000010.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf10, whole genome shotgun sequence 205,140
NZ_QTVN01000011.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf11, whole genome shotgun sequence 163,099
NZ_QTVN01000012.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf12, whole genome shotgun sequence 132,262
NZ_QTVN01000013.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf13, whole genome shotgun sequence 124,386
NZ_QTVN01000014.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf14, whole genome shotgun sequence 122,607
NZ_QTVN01000015.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf15, whole genome shotgun sequence 111,808
NZ_QTVN01000016.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf16, whole genome shotgun sequence 106,044
NZ_QTVN01000017.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf17, whole genome shotgun sequence 101,982
NZ_QTVN01000018.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf18, whole genome shotgun sequence 101,947
NZ_QTVN01000019.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf19, whole genome shotgun sequence 96,603
NZ_QTVN01000020.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf20, whole genome shotgun sequence 75,943
NZ_QTVN01000021.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf21, whole genome shotgun sequence 75,731
NZ_QTVN01000022.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf22, whole genome shotgun sequence 67,592
NZ_QTVN01000023.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf23, whole genome shotgun sequence 56,447
NZ_QTVN01000024.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf24, whole genome shotgun sequence 48,352
NZ_QTVN01000025.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf25, whole genome shotgun sequence 42,098
NZ_QTVN01000026.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf26, whole genome shotgun sequence 27,462
NZ_QTVN01000027.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf27, whole genome shotgun sequence 18,925
NZ_QTVN01000028.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf28, whole genome shotgun sequence 16,335
NZ_QTVN01000029.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf29, whole genome shotgun sequence 12,268
NZ_QTVN01000030.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf30, whole genome shotgun sequence 11,810
NZ_QTVN01000031.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf31, whole genome shotgun sequence 10,914
NZ_QTVN01000032.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf32, whole genome shotgun sequence 9,557
NZ_QTVN01000033.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf33, whole genome shotgun sequence 8,821
NZ_QTVN01000034.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf34, whole genome shotgun sequence 8,532
NZ_QTVN01000035.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf35, whole genome shotgun sequence 6,651
NZ_QTVN01000036.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf36, whole genome shotgun sequence 4,620
NZ_QTVN01000037.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf37, whole genome shotgun sequence 4,225
NZ_QTVN01000038.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf38, whole genome shotgun sequence 4,110
NZ_QTVN01000039.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf39, whole genome shotgun sequence 3,571
NZ_QTVN01000040.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf40, whole genome shotgun sequence 2,666
NZ_QTVN01000041.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf41, whole genome shotgun sequence 2,571
NZ_QTVN01000042.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf42, whole genome shotgun sequence 2,290
NZ_QTVN01000043.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf43, whole genome shotgun sequence 1,977
NZ_QTVN01000044.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf44, whole genome shotgun sequence 1,973
NZ_QTVN01000045.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf45, whole genome shotgun sequence 1,775
NZ_QTVN01000046.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf46, whole genome shotgun sequence 1,426
NZ_QTVN01000047.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf47, whole genome shotgun sequence 1,073
NZ_QTVN01000048.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf48, whole genome shotgun sequence 885
NZ_QTVN01000049.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf49, whole genome shotgun sequence 862
NZ_QTVN01000050.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf50, whole genome shotgun sequence 758
NZ_QTVN01000051.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf51, whole genome shotgun sequence 702
NZ_QTVN01000052.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf52, whole genome shotgun sequence 651

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory