fast.genomicscompare 6,575 genera of bacteria & archaea

 

AF33-28 sp003477885 AF33-28

Genome identifier: GCF_003477885.1

NCBI assembly name: ASM347788v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, AF33-28, AF33-28 sp003477885

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Lachnotalea

Scaffolds: 44

Genes: 4,475 Protein-coding: 4,365 RNAs: 61 pseudogenes: 49

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QUEE01000001.1 Lachnotalea sp. AF33-28 AF33-28.Scaf1, whole genome shotgun sequence 586,880
NZ_QUEE01000002.1 Lachnotalea sp. AF33-28 AF33-28.Scaf2, whole genome shotgun sequence 510,151
NZ_QUEE01000003.1 Lachnotalea sp. AF33-28 AF33-28.Scaf3, whole genome shotgun sequence 450,190
NZ_QUEE01000004.1 Lachnotalea sp. AF33-28 AF33-28.Scaf4, whole genome shotgun sequence 368,222
NZ_QUEE01000005.1 Lachnotalea sp. AF33-28 AF33-28.Scaf5, whole genome shotgun sequence 319,929
NZ_QUEE01000006.1 Lachnotalea sp. AF33-28 AF33-28.Scaf6, whole genome shotgun sequence 281,216
NZ_QUEE01000007.1 Lachnotalea sp. AF33-28 AF33-28.Scaf7, whole genome shotgun sequence 277,699
NZ_QUEE01000008.1 Lachnotalea sp. AF33-28 AF33-28.Scaf8, whole genome shotgun sequence 267,148
NZ_QUEE01000009.1 Lachnotalea sp. AF33-28 AF33-28.Scaf9, whole genome shotgun sequence 231,759
NZ_QUEE01000010.1 Lachnotalea sp. AF33-28 AF33-28.Scaf10, whole genome shotgun sequence 220,555
NZ_QUEE01000011.1 Lachnotalea sp. AF33-28 AF33-28.Scaf11, whole genome shotgun sequence 145,919
NZ_QUEE01000012.1 Lachnotalea sp. AF33-28 AF33-28.Scaf12, whole genome shotgun sequence 145,151
NZ_QUEE01000013.1 Lachnotalea sp. AF33-28 AF33-28.Scaf13, whole genome shotgun sequence 144,414
NZ_QUEE01000014.1 Lachnotalea sp. AF33-28 AF33-28.Scaf14, whole genome shotgun sequence 140,576
NZ_QUEE01000015.1 Lachnotalea sp. AF33-28 AF33-28.Scaf15, whole genome shotgun sequence 140,231
NZ_QUEE01000016.1 Lachnotalea sp. AF33-28 AF33-28.Scaf16, whole genome shotgun sequence 139,726
NZ_QUEE01000017.1 Lachnotalea sp. AF33-28 AF33-28.Scaf17, whole genome shotgun sequence 139,322
NZ_QUEE01000018.1 Lachnotalea sp. AF33-28 AF33-28.Scaf18, whole genome shotgun sequence 131,129
NZ_QUEE01000019.1 Lachnotalea sp. AF33-28 AF33-28.Scaf19, whole genome shotgun sequence 131,071
NZ_QUEE01000020.1 Lachnotalea sp. AF33-28 AF33-28.Scaf20, whole genome shotgun sequence 60,831
NZ_QUEE01000021.1 Lachnotalea sp. AF33-28 AF33-28.Scaf21, whole genome shotgun sequence 56,540
NZ_QUEE01000022.1 Lachnotalea sp. AF33-28 AF33-28.Scaf22, whole genome shotgun sequence 52,402
NZ_QUEE01000023.1 Lachnotalea sp. AF33-28 AF33-28.Scaf23, whole genome shotgun sequence 42,414
NZ_QUEE01000024.1 Lachnotalea sp. AF33-28 AF33-28.Scaf24, whole genome shotgun sequence 40,355
NZ_QUEE01000025.1 Lachnotalea sp. AF33-28 AF33-28.Scaf25, whole genome shotgun sequence 33,125
NZ_QUEE01000026.1 Lachnotalea sp. AF33-28 AF33-28.Scaf26, whole genome shotgun sequence 32,270
NZ_QUEE01000027.1 Lachnotalea sp. AF33-28 AF33-28.Scaf27, whole genome shotgun sequence 24,494
NZ_QUEE01000028.1 Lachnotalea sp. AF33-28 AF33-28.Scaf28, whole genome shotgun sequence 10,800
NZ_QUEE01000029.1 Lachnotalea sp. AF33-28 AF33-28.Scaf29, whole genome shotgun sequence 7,589
NZ_QUEE01000030.1 Lachnotalea sp. AF33-28 AF33-28.Scaf30, whole genome shotgun sequence 5,920
NZ_QUEE01000031.1 Lachnotalea sp. AF33-28 AF33-28.Scaf31, whole genome shotgun sequence 4,841
NZ_QUEE01000032.1 Lachnotalea sp. AF33-28 AF33-28.Scaf32, whole genome shotgun sequence 2,927
NZ_QUEE01000033.1 Lachnotalea sp. AF33-28 AF33-28.Scaf33, whole genome shotgun sequence 2,898
NZ_QUEE01000034.1 Lachnotalea sp. AF33-28 AF33-28.Scaf34, whole genome shotgun sequence 2,896
NZ_QUEE01000035.1 Lachnotalea sp. AF33-28 AF33-28.Scaf35, whole genome shotgun sequence 1,705
NZ_QUEE01000036.1 Lachnotalea sp. AF33-28 AF33-28.Scaf36, whole genome shotgun sequence 1,514
NZ_QUEE01000037.1 Lachnotalea sp. AF33-28 AF33-28.Scaf37, whole genome shotgun sequence 1,428
NZ_QUEE01000038.1 Lachnotalea sp. AF33-28 AF33-28.Scaf38, whole genome shotgun sequence 1,335
NZ_QUEE01000039.1 Lachnotalea sp. AF33-28 AF33-28.Scaf39, whole genome shotgun sequence 1,214
NZ_QUEE01000040.1 Lachnotalea sp. AF33-28 AF33-28.Scaf40, whole genome shotgun sequence 1,176
NZ_QUEE01000041.1 Lachnotalea sp. AF33-28 AF33-28.Scaf41, whole genome shotgun sequence 879
NZ_QUEE01000042.1 Lachnotalea sp. AF33-28 AF33-28.Scaf42, whole genome shotgun sequence 611
NZ_QUEE01000043.1 Lachnotalea sp. AF33-28 AF33-28.Scaf43, whole genome shotgun sequence 600
NZ_QUEE01000044.1 Lachnotalea sp. AF33-28 AF33-28.Scaf44, whole genome shotgun sequence 514

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory