fast.genomicscompare 6,575 genera of bacteria & archaea

 

Alitiscatomonas sp900066055 AM30-24

Genome identifier: GCF_003480435.1

NCBI assembly name: ASM348043v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Alitiscatomonas, Alitiscatomonas sp900066055

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Clostridiaceae, Clostridium

Scaffolds: 84

Genes: 3,205 Protein-coding: 3,047 RNAs: 71 pseudogenes: 87

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QUJB01000001.1 Clostridium sp. AM30-24 AM30-24.Scaf1, whole genome shotgun sequence 549,995
NZ_QUJB01000002.1 Clostridium sp. AM30-24 AM30-24.Scaf2, whole genome shotgun sequence 246,121
NZ_QUJB01000003.1 Clostridium sp. AM30-24 AM30-24.Scaf3, whole genome shotgun sequence 225,599
NZ_QUJB01000004.1 Clostridium sp. AM30-24 AM30-24.Scaf4, whole genome shotgun sequence 225,173
NZ_QUJB01000005.1 Clostridium sp. AM30-24 AM30-24.Scaf5, whole genome shotgun sequence 193,274
NZ_QUJB01000006.1 Clostridium sp. AM30-24 AM30-24.Scaf6, whole genome shotgun sequence 167,132
NZ_QUJB01000007.1 Clostridium sp. AM30-24 AM30-24.Scaf7, whole genome shotgun sequence 156,188
NZ_QUJB01000008.1 Clostridium sp. AM30-24 AM30-24.Scaf8, whole genome shotgun sequence 133,299
NZ_QUJB01000009.1 Clostridium sp. AM30-24 AM30-24.Scaf9, whole genome shotgun sequence 101,731
NZ_QUJB01000010.1 Clostridium sp. AM30-24 AM30-24.Scaf10, whole genome shotgun sequence 100,057
NZ_QUJB01000011.1 Clostridium sp. AM30-24 AM30-24.Scaf11, whole genome shotgun sequence 94,863
NZ_QUJB01000012.1 Clostridium sp. AM30-24 AM30-24.Scaf12, whole genome shotgun sequence 87,211
NZ_QUJB01000013.1 Clostridium sp. AM30-24 AM30-24.Scaf13, whole genome shotgun sequence 85,753
NZ_QUJB01000014.1 Clostridium sp. AM30-24 AM30-24.Scaf14, whole genome shotgun sequence 73,242
NZ_QUJB01000015.1 Clostridium sp. AM30-24 AM30-24.Scaf15, whole genome shotgun sequence 66,106
NZ_QUJB01000016.1 Clostridium sp. AM30-24 AM30-24.Scaf16, whole genome shotgun sequence 61,015
NZ_QUJB01000017.1 Clostridium sp. AM30-24 AM30-24.Scaf17, whole genome shotgun sequence 59,886
NZ_QUJB01000018.1 Clostridium sp. AM30-24 AM30-24.Scaf18, whole genome shotgun sequence 52,621
NZ_QUJB01000019.1 Clostridium sp. AM30-24 AM30-24.Scaf19, whole genome shotgun sequence 51,888
NZ_QUJB01000020.1 Clostridium sp. AM30-24 AM30-24.Scaf20, whole genome shotgun sequence 50,769
NZ_QUJB01000021.1 Clostridium sp. AM30-24 AM30-24.Scaf21, whole genome shotgun sequence 47,601
NZ_QUJB01000022.1 Clostridium sp. AM30-24 AM30-24.Scaf22, whole genome shotgun sequence 46,144
NZ_QUJB01000023.1 Clostridium sp. AM30-24 AM30-24.Scaf23, whole genome shotgun sequence 43,430
NZ_QUJB01000024.1 Clostridium sp. AM30-24 AM30-24.Scaf24, whole genome shotgun sequence 39,322
NZ_QUJB01000025.1 Clostridium sp. AM30-24 AM30-24.Scaf25, whole genome shotgun sequence 35,646
NZ_QUJB01000026.1 Clostridium sp. AM30-24 AM30-24.Scaf26, whole genome shotgun sequence 34,272
NZ_QUJB01000027.1 Clostridium sp. AM30-24 AM30-24.Scaf27, whole genome shotgun sequence 34,236
NZ_QUJB01000028.1 Clostridium sp. AM30-24 AM30-24.Scaf28, whole genome shotgun sequence 31,817
NZ_QUJB01000029.1 Clostridium sp. AM30-24 AM30-24.Scaf29, whole genome shotgun sequence 30,296
NZ_QUJB01000030.1 Clostridium sp. AM30-24 AM30-24.Scaf30, whole genome shotgun sequence 23,338
NZ_QUJB01000031.1 Clostridium sp. AM30-24 AM30-24.Scaf31, whole genome shotgun sequence 19,848
NZ_QUJB01000032.1 Clostridium sp. AM30-24 AM30-24.Scaf32, whole genome shotgun sequence 19,194
NZ_QUJB01000033.1 Clostridium sp. AM30-24 AM30-24.Scaf33, whole genome shotgun sequence 17,507
NZ_QUJB01000034.1 Clostridium sp. AM30-24 AM30-24.Scaf34, whole genome shotgun sequence 14,354
NZ_QUJB01000035.1 Clostridium sp. AM30-24 AM30-24.Scaf35, whole genome shotgun sequence 11,248
NZ_QUJB01000036.1 Clostridium sp. AM30-24 AM30-24.Scaf36, whole genome shotgun sequence 10,894
NZ_QUJB01000037.1 Clostridium sp. AM30-24 AM30-24.Scaf37, whole genome shotgun sequence 10,823
NZ_QUJB01000038.1 Clostridium sp. AM30-24 AM30-24.Scaf38, whole genome shotgun sequence 9,919
NZ_QUJB01000039.1 Clostridium sp. AM30-24 AM30-24.Scaf39, whole genome shotgun sequence 9,874
NZ_QUJB01000040.1 Clostridium sp. AM30-24 AM30-24.Scaf40, whole genome shotgun sequence 9,294
NZ_QUJB01000041.1 Clostridium sp. AM30-24 AM30-24.Scaf41, whole genome shotgun sequence 7,964
NZ_QUJB01000042.1 Clostridium sp. AM30-24 AM30-24.Scaf42, whole genome shotgun sequence 7,221
NZ_QUJB01000043.1 Clostridium sp. AM30-24 AM30-24.Scaf43, whole genome shotgun sequence 6,974
NZ_QUJB01000044.1 Clostridium sp. AM30-24 AM30-24.Scaf44, whole genome shotgun sequence 5,301
NZ_QUJB01000045.1 Clostridium sp. AM30-24 AM30-24.Scaf45, whole genome shotgun sequence 5,174
NZ_QUJB01000046.1 Clostridium sp. AM30-24 AM30-24.Scaf46, whole genome shotgun sequence 5,109
NZ_QUJB01000047.1 Clostridium sp. AM30-24 AM30-24.Scaf47, whole genome shotgun sequence 5,038
NZ_QUJB01000048.1 Clostridium sp. AM30-24 AM30-24.Scaf48, whole genome shotgun sequence 4,845
NZ_QUJB01000049.1 Clostridium sp. AM30-24 AM30-24.Scaf49, whole genome shotgun sequence 3,552
NZ_QUJB01000050.1 Clostridium sp. AM30-24 AM30-24.Scaf50, whole genome shotgun sequence 3,379
NZ_QUJB01000051.1 Clostridium sp. AM30-24 AM30-24.Scaf51, whole genome shotgun sequence 3,090
NZ_QUJB01000052.1 Clostridium sp. AM30-24 AM30-24.Scaf52, whole genome shotgun sequence 3,008
NZ_QUJB01000053.1 Clostridium sp. AM30-24 AM30-24.Scaf53, whole genome shotgun sequence 2,939
NZ_QUJB01000054.1 Clostridium sp. AM30-24 AM30-24.Scaf54, whole genome shotgun sequence 2,585
NZ_QUJB01000055.1 Clostridium sp. AM30-24 AM30-24.Scaf55, whole genome shotgun sequence 2,342
NZ_QUJB01000056.1 Clostridium sp. AM30-24 AM30-24.Scaf56, whole genome shotgun sequence 2,319
NZ_QUJB01000057.1 Clostridium sp. AM30-24 AM30-24.Scaf57, whole genome shotgun sequence 2,013
NZ_QUJB01000058.1 Clostridium sp. AM30-24 AM30-24.Scaf58, whole genome shotgun sequence 1,892
NZ_QUJB01000059.1 Clostridium sp. AM30-24 AM30-24.Scaf59, whole genome shotgun sequence 1,660
NZ_QUJB01000060.1 Clostridium sp. AM30-24 AM30-24.Scaf60, whole genome shotgun sequence 1,588
NZ_QUJB01000061.1 Clostridium sp. AM30-24 AM30-24.Scaf61, whole genome shotgun sequence 1,562
NZ_QUJB01000062.1 Clostridium sp. AM30-24 AM30-24.Scaf62, whole genome shotgun sequence 1,527
NZ_QUJB01000063.1 Clostridium sp. AM30-24 AM30-24.Scaf63, whole genome shotgun sequence 1,521
NZ_QUJB01000064.1 Clostridium sp. AM30-24 AM30-24.Scaf64, whole genome shotgun sequence 1,481
NZ_QUJB01000065.1 Clostridium sp. AM30-24 AM30-24.Scaf65, whole genome shotgun sequence 1,300
NZ_QUJB01000066.1 Clostridium sp. AM30-24 AM30-24.Scaf66, whole genome shotgun sequence 1,249
NZ_QUJB01000067.1 Clostridium sp. AM30-24 AM30-24.Scaf67, whole genome shotgun sequence 1,199
NZ_QUJB01000068.1 Clostridium sp. AM30-24 AM30-24.Scaf68, whole genome shotgun sequence 1,191
NZ_QUJB01000069.1 Clostridium sp. AM30-24 AM30-24.Scaf69, whole genome shotgun sequence 1,180
NZ_QUJB01000070.1 Clostridium sp. AM30-24 AM30-24.Scaf70, whole genome shotgun sequence 997
NZ_QUJB01000071.1 Clostridium sp. AM30-24 AM30-24.Scaf71, whole genome shotgun sequence 949
NZ_QUJB01000072.1 Clostridium sp. AM30-24 AM30-24.Scaf72, whole genome shotgun sequence 914
NZ_QUJB01000073.1 Clostridium sp. AM30-24 AM30-24.Scaf73, whole genome shotgun sequence 906
NZ_QUJB01000074.1 Clostridium sp. AM30-24 AM30-24.Scaf74, whole genome shotgun sequence 893
NZ_QUJB01000075.1 Clostridium sp. AM30-24 AM30-24.Scaf75, whole genome shotgun sequence 871
NZ_QUJB01000076.1 Clostridium sp. AM30-24 AM30-24.Scaf76, whole genome shotgun sequence 870
NZ_QUJB01000077.1 Clostridium sp. AM30-24 AM30-24.Scaf77, whole genome shotgun sequence 750
NZ_QUJB01000078.1 Clostridium sp. AM30-24 AM30-24.Scaf78, whole genome shotgun sequence 733
NZ_QUJB01000079.1 Clostridium sp. AM30-24 AM30-24.Scaf79, whole genome shotgun sequence 722
NZ_QUJB01000080.1 Clostridium sp. AM30-24 AM30-24.Scaf80, whole genome shotgun sequence 596
NZ_QUJB01000081.1 Clostridium sp. AM30-24 AM30-24.Scaf81, whole genome shotgun sequence 586
NZ_QUJB01000082.1 Clostridium sp. AM30-24 AM30-24.Scaf82, whole genome shotgun sequence 576
NZ_QUJB01000083.1 Clostridium sp. AM30-24 AM30-24.Scaf83, whole genome shotgun sequence 554
NZ_QUJB01000084.1 Clostridium sp. AM30-24 AM30-24.Scaf84, whole genome shotgun sequence 529

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory