fast.genomicscompare 6,575 genera of bacteria & archaea

 

Dichotomicrobium thermohalophilum DSM 5002

Genome identifier: GCF_003550175.1

NCBI assembly name: ASM355017v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhodomicrobiaceae, Dichotomicrobium, Dichotomicrobium thermohalophilum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Hyphomicrobiaceae, Dichotomicrobium, Dichotomicrobium thermohalophilum

Scaffolds: 7

Genes: 2,811 Protein-coding: 2,741 RNAs: 53 pseudogenes: 17

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QXDF01000001.1 Dichotomicrobium thermohalophilum strain DSM 5002 Ga0170455_11, whole genome shotgun sequence 2,150,849
NZ_QXDF01000002.1 Dichotomicrobium thermohalophilum strain DSM 5002 Ga0170455_12, whole genome shotgun sequence 362,243
NZ_QXDF01000003.1 Dichotomicrobium thermohalophilum strain DSM 5002 Ga0170455_13, whole genome shotgun sequence 195,270
NZ_QXDF01000004.1 Dichotomicrobium thermohalophilum strain DSM 5002 Ga0170455_14, whole genome shotgun sequence 128,245
NZ_QXDF01000005.1 Dichotomicrobium thermohalophilum strain DSM 5002 Ga0170455_15, whole genome shotgun sequence 86,764
NZ_QXDF01000006.1 Dichotomicrobium thermohalophilum strain DSM 5002 Ga0170455_16, whole genome shotgun sequence 63,184
NZ_QXDF01000007.1 Dichotomicrobium thermohalophilum strain DSM 5002 Ga0170455_17, whole genome shotgun sequence 1,490

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory