fast.genomicscompare 6,575 genera of bacteria & archaea

 

Algihabitans albus HHTR 118

Genome identifier: GCF_003572205.1

NCBI assembly name: ASM357220v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Kiloniellales, DSM-21159, Algihabitans, Algihabitans albus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Rhodospirillaceae, Algihabitans, Algihabitans albus

Scaffolds: 20

Genes: 4,401 Protein-coding: 4,322 RNAs: 53 pseudogenes: 26

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QXNY01000001.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_1, whole genome shotgun sequence 319,136
NZ_QXNY01000002.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_2, whole genome shotgun sequence 1,111,282
NZ_QXNY01000003.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_3, whole genome shotgun sequence 741,075
NZ_QXNY01000004.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_4, whole genome shotgun sequence 842,552
NZ_QXNY01000005.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_5, whole genome shotgun sequence 573,325
NZ_QXNY01000006.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_6, whole genome shotgun sequence 539,086
NZ_QXNY01000007.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_7, whole genome shotgun sequence 133,416
NZ_QXNY01000008.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_8, whole genome shotgun sequence 106,164
NZ_QXNY01000009.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_9, whole genome shotgun sequence 15,692
NZ_QXNY01000010.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_10, whole genome shotgun sequence 137,369
NZ_QXNY01000011.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_11, whole genome shotgun sequence 144,830
NZ_QXNY01000012.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_12, whole genome shotgun sequence 6,152
NZ_QXNY01000013.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_13, whole genome shotgun sequence 969
NZ_QXNY01000014.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_14, whole genome shotgun sequence 1,253
NZ_QXNY01000015.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_15, whole genome shotgun sequence 2,092
NZ_QXNY01000016.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_16, whole genome shotgun sequence 1,443
NZ_QXNY01000017.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_17, whole genome shotgun sequence 1,532
NZ_QXNY01000018.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_18, whole genome shotgun sequence 1,235
NZ_QXNY01000019.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_19, whole genome shotgun sequence 1,686
NZ_QXNY01000020.1 Algihabitans albus strain HHTR 118 1K03486_S44_L002_R1_001_(paired)_contig_20, whole genome shotgun sequence 787

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory